Cargando…

LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers

Background: Layilin (LAYN) is a critical gene that regulates T cell function. However, the correlations of LAYN to prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. Methods: LAYN expression was analyzed via the Oncomine database and Tumor Immune Estimation Resource (T...

Descripción completa

Detalles Bibliográficos
Autores principales: Pan, Jing-hua, Zhou, Hong, Cooper, Laura, Huang, Jin-lian, Zhu, Sheng-bin, Zhao, Xiao-xu, Ding, Hui, Pan, Yun-long, Rong, Lijun
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6362421/
https://www.ncbi.nlm.nih.gov/pubmed/30761122
http://dx.doi.org/10.3389/fimmu.2019.00006
_version_ 1783392913203396608
author Pan, Jing-hua
Zhou, Hong
Cooper, Laura
Huang, Jin-lian
Zhu, Sheng-bin
Zhao, Xiao-xu
Ding, Hui
Pan, Yun-long
Rong, Lijun
author_facet Pan, Jing-hua
Zhou, Hong
Cooper, Laura
Huang, Jin-lian
Zhu, Sheng-bin
Zhao, Xiao-xu
Ding, Hui
Pan, Yun-long
Rong, Lijun
author_sort Pan, Jing-hua
collection PubMed
description Background: Layilin (LAYN) is a critical gene that regulates T cell function. However, the correlations of LAYN to prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. Methods: LAYN expression was analyzed via the Oncomine database and Tumor Immune Estimation Resource (TIMER) site. We evaluated the influence of LAYN on clinical prognosis using Kaplan-Meier plotter, the PrognoScan database and Gene Expression Profiling Interactive Analysis (GEPIA). The correlations between LAYN and cancer immune infiltrates was investigated via TIMER. In addition, correlations between LAYN expression and gene marker sets of immune infiltrates were analyzed by TIMER and GEPIA. Results: A cohort (GSE17536) of colorectal cancer patients showed that high LAYN expression was associated with poorer overall survival (OS), disease-specific survival (DSS), and disease-free survival (DFS). In addition, high LAYN expression was significantly correlated with poor OS and progression-free survival (PFS) in gastric cancers (OS HR = 1.97, P = 3.6e-10; PFS HR = 2.12, P = 2.3e-10). Moreover, LAYN significantly impacts the prognosis of diverse cancers via The Cancer Genome Atlas (TCGA). Specifically, high LAYN expression was correlated with worse OS and PFS in stage 2 to 4 but not stage 1 and stage N0 gastric cancer patients (P = 0.28, 0.34; P = 0.073, 0.092). LAYN expression was positively correlated with infiltrating levels of CD4+ T and CD8+ T cells, macrophages, neutrophils, and dendritic cells (DCs) in colon adenocarcinoma (COAD) and stomach adenocarcinoma (STAD). LAYN expression showed strong correlations with diverse immune marker sets in COAD and STAD. Conclusions: These findings suggest that LAYN is correlated with prognosis and immune infiltrating levels of, including those of CD8+ T cells, CD4+ T cells, macrophages, neutrophils, and DCs in multiple cancers, especially in colon and gastric cancer patients. In addition, LAYN expression potentially contributes to regulation of tumor-associated macrophages (TAMs), DCs, T cell exhaustion and Tregs in colon and gastric cancer. These findings suggest that LAYN can be used as a prognostic biomarker for determining prognosis and immune infiltration in gastric and colon cancers.
format Online
Article
Text
id pubmed-6362421
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-63624212019-02-13 LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers Pan, Jing-hua Zhou, Hong Cooper, Laura Huang, Jin-lian Zhu, Sheng-bin Zhao, Xiao-xu Ding, Hui Pan, Yun-long Rong, Lijun Front Immunol Immunology Background: Layilin (LAYN) is a critical gene that regulates T cell function. However, the correlations of LAYN to prognosis and tumor-infiltrating lymphocytes in different cancers remain unclear. Methods: LAYN expression was analyzed via the Oncomine database and Tumor Immune Estimation Resource (TIMER) site. We evaluated the influence of LAYN on clinical prognosis using Kaplan-Meier plotter, the PrognoScan database and Gene Expression Profiling Interactive Analysis (GEPIA). The correlations between LAYN and cancer immune infiltrates was investigated via TIMER. In addition, correlations between LAYN expression and gene marker sets of immune infiltrates were analyzed by TIMER and GEPIA. Results: A cohort (GSE17536) of colorectal cancer patients showed that high LAYN expression was associated with poorer overall survival (OS), disease-specific survival (DSS), and disease-free survival (DFS). In addition, high LAYN expression was significantly correlated with poor OS and progression-free survival (PFS) in gastric cancers (OS HR = 1.97, P = 3.6e-10; PFS HR = 2.12, P = 2.3e-10). Moreover, LAYN significantly impacts the prognosis of diverse cancers via The Cancer Genome Atlas (TCGA). Specifically, high LAYN expression was correlated with worse OS and PFS in stage 2 to 4 but not stage 1 and stage N0 gastric cancer patients (P = 0.28, 0.34; P = 0.073, 0.092). LAYN expression was positively correlated with infiltrating levels of CD4+ T and CD8+ T cells, macrophages, neutrophils, and dendritic cells (DCs) in colon adenocarcinoma (COAD) and stomach adenocarcinoma (STAD). LAYN expression showed strong correlations with diverse immune marker sets in COAD and STAD. Conclusions: These findings suggest that LAYN is correlated with prognosis and immune infiltrating levels of, including those of CD8+ T cells, CD4+ T cells, macrophages, neutrophils, and DCs in multiple cancers, especially in colon and gastric cancer patients. In addition, LAYN expression potentially contributes to regulation of tumor-associated macrophages (TAMs), DCs, T cell exhaustion and Tregs in colon and gastric cancer. These findings suggest that LAYN can be used as a prognostic biomarker for determining prognosis and immune infiltration in gastric and colon cancers. Frontiers Media S.A. 2019-01-29 /pmc/articles/PMC6362421/ /pubmed/30761122 http://dx.doi.org/10.3389/fimmu.2019.00006 Text en Copyright © 2019 Pan, Zhou, Cooper, Huang, Zhu, Zhao, Ding, Pan and Rong. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Immunology
Pan, Jing-hua
Zhou, Hong
Cooper, Laura
Huang, Jin-lian
Zhu, Sheng-bin
Zhao, Xiao-xu
Ding, Hui
Pan, Yun-long
Rong, Lijun
LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers
title LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers
title_full LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers
title_fullStr LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers
title_full_unstemmed LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers
title_short LAYN Is a Prognostic Biomarker and Correlated With Immune Infiltrates in Gastric and Colon Cancers
title_sort layn is a prognostic biomarker and correlated with immune infiltrates in gastric and colon cancers
topic Immunology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6362421/
https://www.ncbi.nlm.nih.gov/pubmed/30761122
http://dx.doi.org/10.3389/fimmu.2019.00006
work_keys_str_mv AT panjinghua laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT zhouhong laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT cooperlaura laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT huangjinlian laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT zhushengbin laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT zhaoxiaoxu laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT dinghui laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT panyunlong laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers
AT ronglijun laynisaprognosticbiomarkerandcorrelatedwithimmuneinfiltratesingastricandcoloncancers