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Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered)
The syntheses and structures of five molecular salts of protonated 4,4,7,7-tetramethyl-3a,5,6,7a-tetrahydrobenzothiazol-2-ylamine (C(11)H(19)N(2)S(+)) with different deprotonated carboxylic acids (4-methylbenzoic acid, 4-bromobenzoic acid, 3,5-dinitrobenzoic acid, fumaric acid and succi...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
International Union of Crystallography
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6362640/ https://www.ncbi.nlm.nih.gov/pubmed/30800445 http://dx.doi.org/10.1107/S2056989018018224 |
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author | Shaibah, Mohammed A. E. Sagar, Belakavadi K. Yathirajan, Hemmige S. Cordes, David B. Slawin, Alexandra M. Z. Harrison, William T. A. |
author_facet | Shaibah, Mohammed A. E. Sagar, Belakavadi K. Yathirajan, Hemmige S. Cordes, David B. Slawin, Alexandra M. Z. Harrison, William T. A. |
author_sort | Shaibah, Mohammed A. E. |
collection | PubMed |
description | The syntheses and structures of five molecular salts of protonated 4,4,7,7-tetramethyl-3a,5,6,7a-tetrahydrobenzothiazol-2-ylamine (C(11)H(19)N(2)S(+)) with different deprotonated carboxylic acids (4-methylbenzoic acid, 4-bromobenzoic acid, 3,5-dinitrobenzoic acid, fumaric acid and succinic acid) are reported, namely 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium 4-methylbenzoate, C(11)H(19)N(2)S(+)·C(8)H(7)O(2) (−), (I), 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium 4-bromobenzoate, C(11)H(19)N(2)S(+)·C(7)H(4)BrO(2) (−), (II), 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium 3,5-dinitrobenzoate, C(11)H(19)N(2)S(+)·C(7)H(3)N(2)O(6) (−), (III), bis(2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium) fumarate, 2C(11)H(19)N(2)S(+)·C(4)H(2)O(4) (2−),(IV), and the 1:1 co-crystal of bis(2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium) succinate and 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium hydrogen succinate 4,4,7,7-tetramethyl-3a,5,6,7a-tetrahydrobenzothiazol-2-ylamine, 1.5C(11)H(19)N(2)S(+)·0.5C(4)H(4)O(4) (2−)·0.5C(4)H(5)O(4) (−). 0.5C(11)H(18)N(2)S, (V). In every case, the cation protonation occurs at the N atom of the thiazole ring and the six-membered ring adopts a half-chair conformation (in some cases, the deviating methylene groups are disordered over two sets of sites). The C—N bond lengths of the nominal –NH(+)=C—NH(2) fragment of the cation are indistinguishable, indicating a significant contribution of the –NH—C=N(+)H(2) resonance form to the structure. The packing for (I)–(V) features a robust local R (2) (2)(8) loop motif in which the cation forms two near-linear N—H⋯O hydrogen bonds from the N(+)—H group and syn H atom of the amine group to the carboxylate group of an adjacent anion [(V) shows disorder of one of these bonds over N—H⋯O and N⋯H—O contributors but the same R (2) (2)(8) loop results for both disorder components]. The anti H atom of the –NH(2) group also forms an N—H⋯O hydrogen bond, which results in [001] chains in (I) and (II), isolated centrosymmetric tetramers in (III) and [100] chains in (IV) and (V). Hirshfeld fingerprint plots and contact percentages for the different types of contacts of the cations are discussed. |
format | Online Article Text |
id | pubmed-6362640 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | International Union of Crystallography |
record_format | MEDLINE/PubMed |
spelling | pubmed-63626402019-02-22 Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) Shaibah, Mohammed A. E. Sagar, Belakavadi K. Yathirajan, Hemmige S. Cordes, David B. Slawin, Alexandra M. Z. Harrison, William T. A. Acta Crystallogr E Crystallogr Commun Research Communications The syntheses and structures of five molecular salts of protonated 4,4,7,7-tetramethyl-3a,5,6,7a-tetrahydrobenzothiazol-2-ylamine (C(11)H(19)N(2)S(+)) with different deprotonated carboxylic acids (4-methylbenzoic acid, 4-bromobenzoic acid, 3,5-dinitrobenzoic acid, fumaric acid and succinic acid) are reported, namely 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium 4-methylbenzoate, C(11)H(19)N(2)S(+)·C(8)H(7)O(2) (−), (I), 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium 4-bromobenzoate, C(11)H(19)N(2)S(+)·C(7)H(4)BrO(2) (−), (II), 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium 3,5-dinitrobenzoate, C(11)H(19)N(2)S(+)·C(7)H(3)N(2)O(6) (−), (III), bis(2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium) fumarate, 2C(11)H(19)N(2)S(+)·C(4)H(2)O(4) (2−),(IV), and the 1:1 co-crystal of bis(2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium) succinate and 2-amino-4,4,7,7-tetramethyl-4,5,6,7-tetrahydro-1,3-benzothiazol-3-ium hydrogen succinate 4,4,7,7-tetramethyl-3a,5,6,7a-tetrahydrobenzothiazol-2-ylamine, 1.5C(11)H(19)N(2)S(+)·0.5C(4)H(4)O(4) (2−)·0.5C(4)H(5)O(4) (−). 0.5C(11)H(18)N(2)S, (V). In every case, the cation protonation occurs at the N atom of the thiazole ring and the six-membered ring adopts a half-chair conformation (in some cases, the deviating methylene groups are disordered over two sets of sites). The C—N bond lengths of the nominal –NH(+)=C—NH(2) fragment of the cation are indistinguishable, indicating a significant contribution of the –NH—C=N(+)H(2) resonance form to the structure. The packing for (I)–(V) features a robust local R (2) (2)(8) loop motif in which the cation forms two near-linear N—H⋯O hydrogen bonds from the N(+)—H group and syn H atom of the amine group to the carboxylate group of an adjacent anion [(V) shows disorder of one of these bonds over N—H⋯O and N⋯H—O contributors but the same R (2) (2)(8) loop results for both disorder components]. The anti H atom of the –NH(2) group also forms an N—H⋯O hydrogen bond, which results in [001] chains in (I) and (II), isolated centrosymmetric tetramers in (III) and [100] chains in (IV) and (V). Hirshfeld fingerprint plots and contact percentages for the different types of contacts of the cations are discussed. International Union of Crystallography 2019-01-08 /pmc/articles/PMC6362640/ /pubmed/30800445 http://dx.doi.org/10.1107/S2056989018018224 Text en © Shaibah et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/ |
spellingShingle | Research Communications Shaibah, Mohammed A. E. Sagar, Belakavadi K. Yathirajan, Hemmige S. Cordes, David B. Slawin, Alexandra M. Z. Harrison, William T. A. Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) |
title | Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) |
title_full | Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) |
title_fullStr | Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) |
title_full_unstemmed | Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) |
title_short | Hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [Image: see text](8) supramolecular motif (even when disordered) |
title_sort | hydrogen-bonded molecular salts of reduced benzothiazole derivatives with carboxylates: a robust [image: see text](8) supramolecular motif (even when disordered) |
topic | Research Communications |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6362640/ https://www.ncbi.nlm.nih.gov/pubmed/30800445 http://dx.doi.org/10.1107/S2056989018018224 |
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