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Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions

In each of the compounds 1-[(1,3-benzodioxol-5-yl)methyl]-4-(3-fluoro­benzo­yl)piperazine, C(19)H(19)FN(2)O(3) (I), 1-[(1,3-benzodioxol-5-yl)methyl]-4-(2,6-di­fluoro­benzo­yl)piperazine, C(19)H(18)F(2)N(2)O(3) (II), and 1-[(1,3-benzodioxol-5-yl)methyl]-4-(2,4-di­chloro­benzo­yl)piperazine, C(19)H(19...

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Autores principales: Mahesha, Ninganayaka, Sagar, Belakavadi K., Yathirajan, Hemmige S., Furuya, Tetsundo, Haraguchi, Tomoyuki, Akitsu, Takashiro, Glidewell, Christopher
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6362650/
https://www.ncbi.nlm.nih.gov/pubmed/30800451
http://dx.doi.org/10.1107/S2056989019000458
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author Mahesha, Ninganayaka
Sagar, Belakavadi K.
Yathirajan, Hemmige S.
Furuya, Tetsundo
Haraguchi, Tomoyuki
Akitsu, Takashiro
Glidewell, Christopher
author_facet Mahesha, Ninganayaka
Sagar, Belakavadi K.
Yathirajan, Hemmige S.
Furuya, Tetsundo
Haraguchi, Tomoyuki
Akitsu, Takashiro
Glidewell, Christopher
author_sort Mahesha, Ninganayaka
collection PubMed
description In each of the compounds 1-[(1,3-benzodioxol-5-yl)methyl]-4-(3-fluoro­benzo­yl)piperazine, C(19)H(19)FN(2)O(3) (I), 1-[(1,3-benzodioxol-5-yl)methyl]-4-(2,6-di­fluoro­benzo­yl)piperazine, C(19)H(18)F(2)N(2)O(3) (II), and 1-[(1,3-benzodioxol-5-yl)methyl]-4-(2,4-di­chloro­benzo­yl)piperazine, C(19)H(19)Cl(2)N(2)O(3) (III), the piperazine rings adopt a chair conformation with the (1,3-benzodioxol-5-yl)methyl substituent occupying an equatorial site: the five-membered rings are all slightly folded across the O⋯O line leading to envelope conformations. The dihedral angle between the planar amidic fragment and the haloaryl ring is 62.97 (5)° in (I) but 77.72 (12)° and 75.50 (5)° in (II) and (III), respectively. Despite their similarity in constitution and conformation, the supra­molecular inter­actions in (I)–(III) differ: in (I), a combination of C—H⋯O and C—H⋯π(arene) hydrogen bonds links the mol­ecules into a three-dimensional framework structure, but there are no hydrogen bonds of any sort in either (II) or (III), although the structure of (III) contains a short Cl⋯Cl contact between inversion-related pairs of mol­ecules.
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spelling pubmed-63626502019-02-22 Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions Mahesha, Ninganayaka Sagar, Belakavadi K. Yathirajan, Hemmige S. Furuya, Tetsundo Haraguchi, Tomoyuki Akitsu, Takashiro Glidewell, Christopher Acta Crystallogr E Crystallogr Commun Research Communications In each of the compounds 1-[(1,3-benzodioxol-5-yl)methyl]-4-(3-fluoro­benzo­yl)piperazine, C(19)H(19)FN(2)O(3) (I), 1-[(1,3-benzodioxol-5-yl)methyl]-4-(2,6-di­fluoro­benzo­yl)piperazine, C(19)H(18)F(2)N(2)O(3) (II), and 1-[(1,3-benzodioxol-5-yl)methyl]-4-(2,4-di­chloro­benzo­yl)piperazine, C(19)H(19)Cl(2)N(2)O(3) (III), the piperazine rings adopt a chair conformation with the (1,3-benzodioxol-5-yl)methyl substituent occupying an equatorial site: the five-membered rings are all slightly folded across the O⋯O line leading to envelope conformations. The dihedral angle between the planar amidic fragment and the haloaryl ring is 62.97 (5)° in (I) but 77.72 (12)° and 75.50 (5)° in (II) and (III), respectively. Despite their similarity in constitution and conformation, the supra­molecular inter­actions in (I)–(III) differ: in (I), a combination of C—H⋯O and C—H⋯π(arene) hydrogen bonds links the mol­ecules into a three-dimensional framework structure, but there are no hydrogen bonds of any sort in either (II) or (III), although the structure of (III) contains a short Cl⋯Cl contact between inversion-related pairs of mol­ecules. International Union of Crystallography 2019-01-11 /pmc/articles/PMC6362650/ /pubmed/30800451 http://dx.doi.org/10.1107/S2056989019000458 Text en © Mahesha et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Mahesha, Ninganayaka
Sagar, Belakavadi K.
Yathirajan, Hemmige S.
Furuya, Tetsundo
Haraguchi, Tomoyuki
Akitsu, Takashiro
Glidewell, Christopher
Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
title Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
title_full Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
title_fullStr Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
title_full_unstemmed Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
title_short Three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
title_sort three closely related 1-[(1,3-benzodioxol-5-yl)methyl]-4-(halobenzo­yl)piperazines: similar mol­ecular structures but different inter­molecular inter­actions
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6362650/
https://www.ncbi.nlm.nih.gov/pubmed/30800451
http://dx.doi.org/10.1107/S2056989019000458
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