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Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma
BACKGROUND: Histopathologic examination of melanocytic neoplasms can be challenging and subjective, with no specific circulating or tissue-based biomarkers currently available. Recently, a circulating 38-microRNA profile of melanoma (Mel38) was described. In this study, Mel38 expression and its impa...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6363168/ https://www.ncbi.nlm.nih.gov/pubmed/30721246 http://dx.doi.org/10.1371/journal.pone.0211504 |
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author | Van Laar, Ryan Lincoln, Mitchel Fereday, Sian |
author_facet | Van Laar, Ryan Lincoln, Mitchel Fereday, Sian |
author_sort | Van Laar, Ryan |
collection | PubMed |
description | BACKGROUND: Histopathologic examination of melanocytic neoplasms can be challenging and subjective, with no specific circulating or tissue-based biomarkers currently available. Recently, a circulating 38-microRNA profile of melanoma (Mel38) was described. In this study, Mel38 expression and its impact on downstream mRNA regulation in solid tissue is examined. METHODS: Mel38 was applied to archival, clinically-annotated, solid-tissue genomic datasets representing benign naevi, primary and metastatic melanoma. Statistical analysis of the signature in relation to disease status, patient outcome and molecular pathways was performed. RESULTS: Mel38 is able to stratify genomic data from solid tissue biopsies on the basis of disease status and differences in melanoma-specific survival. Experimentally-verified messenger-RNA targets of Mel38 also exhibit prognostic expression patterns and represent key molecular pathways and events in melanoma development and progression. CONCLUSION: The Mel38 microRNA profile may have diagnostic and prognostic utility in solid tissue as well as being a robust circulating biomarker of melanoma. |
format | Online Article Text |
id | pubmed-6363168 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-63631682019-02-15 Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma Van Laar, Ryan Lincoln, Mitchel Fereday, Sian PLoS One Research Article BACKGROUND: Histopathologic examination of melanocytic neoplasms can be challenging and subjective, with no specific circulating or tissue-based biomarkers currently available. Recently, a circulating 38-microRNA profile of melanoma (Mel38) was described. In this study, Mel38 expression and its impact on downstream mRNA regulation in solid tissue is examined. METHODS: Mel38 was applied to archival, clinically-annotated, solid-tissue genomic datasets representing benign naevi, primary and metastatic melanoma. Statistical analysis of the signature in relation to disease status, patient outcome and molecular pathways was performed. RESULTS: Mel38 is able to stratify genomic data from solid tissue biopsies on the basis of disease status and differences in melanoma-specific survival. Experimentally-verified messenger-RNA targets of Mel38 also exhibit prognostic expression patterns and represent key molecular pathways and events in melanoma development and progression. CONCLUSION: The Mel38 microRNA profile may have diagnostic and prognostic utility in solid tissue as well as being a robust circulating biomarker of melanoma. Public Library of Science 2019-02-05 /pmc/articles/PMC6363168/ /pubmed/30721246 http://dx.doi.org/10.1371/journal.pone.0211504 Text en © 2019 Van Laar et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Van Laar, Ryan Lincoln, Mitchel Fereday, Sian Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma |
title | Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma |
title_full | Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma |
title_fullStr | Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma |
title_full_unstemmed | Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma |
title_short | Characterisation and validation of Mel38; A multi-tissue microRNA signature of cutaneous melanoma |
title_sort | characterisation and validation of mel38; a multi-tissue microrna signature of cutaneous melanoma |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6363168/ https://www.ncbi.nlm.nih.gov/pubmed/30721246 http://dx.doi.org/10.1371/journal.pone.0211504 |
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