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Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences

Cystoseira is a common brown algal genus widely distributed throughout the Atlantic and Mediterranean regions whose taxonomical assignment of specimens is often hampered by intra- and interspecific morphological variability. In this study, three mitochondrial regions, namely cytochrome oxidase subun...

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Autores principales: Bruno de Sousa, Carolina, Cox, Cymon J., Brito, Luís, Pavão, Maria Madalena, Pereira, Hugo, Ferreira, Ana, Ginja, Catarina, Campino, Lenea, Bermejo, Ricardo, Parente, Manuela, Varela, João
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6364706/
https://www.ncbi.nlm.nih.gov/pubmed/30699208
http://dx.doi.org/10.1371/journal.pone.0210143
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author Bruno de Sousa, Carolina
Cox, Cymon J.
Brito, Luís
Pavão, Maria Madalena
Pereira, Hugo
Ferreira, Ana
Ginja, Catarina
Campino, Lenea
Bermejo, Ricardo
Parente, Manuela
Varela, João
author_facet Bruno de Sousa, Carolina
Cox, Cymon J.
Brito, Luís
Pavão, Maria Madalena
Pereira, Hugo
Ferreira, Ana
Ginja, Catarina
Campino, Lenea
Bermejo, Ricardo
Parente, Manuela
Varela, João
author_sort Bruno de Sousa, Carolina
collection PubMed
description Cystoseira is a common brown algal genus widely distributed throughout the Atlantic and Mediterranean regions whose taxonomical assignment of specimens is often hampered by intra- and interspecific morphological variability. In this study, three mitochondrial regions, namely cytochrome oxidase subunit 1 (COI), 23S rDNA (23S), and 23S-tRNAVal intergenic spacer (mt-spacer) were used to analyse the phylogenetic relationships of 22 Cystoseira taxa (n = 93 samples). A total of 135 sequences (48 from COI, 43 from 23S and 44 from mt-spacer) were newly generated and analysed together with Cystoseira sequences (9 COI, 31 23S and 35 mt-spacer) from other authors. Phylogenetic analysis of these three markers identified 3 well-resolved clades and also corroborated the polyphyletic nature of the genus. The resolution of Cystoseira taxa within the three clades improves significantly when the inclusion of specimens of related genera was minimized. COI and mt-spacer markers resolved the phylogeny of some of the Cystoseira taxa, such as the C. baccata, C. foeniculacea and C. usneoides. Furthermore, trends between phylogeny, embryonic development and available chemotaxonomic classifications were identified, showing that phylogenetic, chemical and morphological data should be taken into account to study the evolutionary relationships among the algae currently classified as Cystoseira. The resolution of Cystoseira macroalgae into three well supported clades achieved here is relevant for a more accurate isolation and identification of natural compounds and the implementation of conservation measures for target species.
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spelling pubmed-63647062019-02-15 Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences Bruno de Sousa, Carolina Cox, Cymon J. Brito, Luís Pavão, Maria Madalena Pereira, Hugo Ferreira, Ana Ginja, Catarina Campino, Lenea Bermejo, Ricardo Parente, Manuela Varela, João PLoS One Research Article Cystoseira is a common brown algal genus widely distributed throughout the Atlantic and Mediterranean regions whose taxonomical assignment of specimens is often hampered by intra- and interspecific morphological variability. In this study, three mitochondrial regions, namely cytochrome oxidase subunit 1 (COI), 23S rDNA (23S), and 23S-tRNAVal intergenic spacer (mt-spacer) were used to analyse the phylogenetic relationships of 22 Cystoseira taxa (n = 93 samples). A total of 135 sequences (48 from COI, 43 from 23S and 44 from mt-spacer) were newly generated and analysed together with Cystoseira sequences (9 COI, 31 23S and 35 mt-spacer) from other authors. Phylogenetic analysis of these three markers identified 3 well-resolved clades and also corroborated the polyphyletic nature of the genus. The resolution of Cystoseira taxa within the three clades improves significantly when the inclusion of specimens of related genera was minimized. COI and mt-spacer markers resolved the phylogeny of some of the Cystoseira taxa, such as the C. baccata, C. foeniculacea and C. usneoides. Furthermore, trends between phylogeny, embryonic development and available chemotaxonomic classifications were identified, showing that phylogenetic, chemical and morphological data should be taken into account to study the evolutionary relationships among the algae currently classified as Cystoseira. The resolution of Cystoseira macroalgae into three well supported clades achieved here is relevant for a more accurate isolation and identification of natural compounds and the implementation of conservation measures for target species. Public Library of Science 2019-01-30 /pmc/articles/PMC6364706/ /pubmed/30699208 http://dx.doi.org/10.1371/journal.pone.0210143 Text en © 2019 Bruno de Sousa et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Bruno de Sousa, Carolina
Cox, Cymon J.
Brito, Luís
Pavão, Maria Madalena
Pereira, Hugo
Ferreira, Ana
Ginja, Catarina
Campino, Lenea
Bermejo, Ricardo
Parente, Manuela
Varela, João
Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences
title Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences
title_full Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences
title_fullStr Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences
title_full_unstemmed Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences
title_short Improved phylogeny of brown algae Cystoseira (Fucales) from the Atlantic-Mediterranean region based on mitochondrial sequences
title_sort improved phylogeny of brown algae cystoseira (fucales) from the atlantic-mediterranean region based on mitochondrial sequences
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6364706/
https://www.ncbi.nlm.nih.gov/pubmed/30699208
http://dx.doi.org/10.1371/journal.pone.0210143
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