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Multi-channel framelet denoising of diffusion-weighted images
Diffusion MRI derives its contrast from MR signal attenuation induced by the movement of water molecules in microstructural environments. Associated with the signal attenuation is the reduction of signal-to-noise ratio (SNR). Methods based on total variation (TV) have shown superior performance in i...
Autores principales: | , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6364918/ https://www.ncbi.nlm.nih.gov/pubmed/30726257 http://dx.doi.org/10.1371/journal.pone.0211621 |
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author | Chen, Geng Zhang, Jian Zhang, Yong Dong, Bin Shen, Dinggang Yap, Pew-Thian |
author_facet | Chen, Geng Zhang, Jian Zhang, Yong Dong, Bin Shen, Dinggang Yap, Pew-Thian |
author_sort | Chen, Geng |
collection | PubMed |
description | Diffusion MRI derives its contrast from MR signal attenuation induced by the movement of water molecules in microstructural environments. Associated with the signal attenuation is the reduction of signal-to-noise ratio (SNR). Methods based on total variation (TV) have shown superior performance in image noise reduction. However, TV denoising can result in stair-casing effects due to the inherent piecewise-constant assumption. In this paper, we propose a tight wavelet frame based approach for edge-preserving denoising of diffusion-weighted (DW) images. Specifically, we employ the unitary extension principle (UEP) to generate frames that are discrete analogues to differential operators of various orders, which will help avoid stair-casing effects. Instead of denoising each DW image separately, we collaboratively denoise groups of DW images acquired with adjacent gradient directions. In addition, we introduce a very efficient method for solving an ℓ(0) denoising problem that involves only thresholding and solving a trivial inverse problem. We demonstrate the effectiveness of our method qualitatively and quantitatively using synthetic and real data. |
format | Online Article Text |
id | pubmed-6364918 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-63649182019-02-22 Multi-channel framelet denoising of diffusion-weighted images Chen, Geng Zhang, Jian Zhang, Yong Dong, Bin Shen, Dinggang Yap, Pew-Thian PLoS One Research Article Diffusion MRI derives its contrast from MR signal attenuation induced by the movement of water molecules in microstructural environments. Associated with the signal attenuation is the reduction of signal-to-noise ratio (SNR). Methods based on total variation (TV) have shown superior performance in image noise reduction. However, TV denoising can result in stair-casing effects due to the inherent piecewise-constant assumption. In this paper, we propose a tight wavelet frame based approach for edge-preserving denoising of diffusion-weighted (DW) images. Specifically, we employ the unitary extension principle (UEP) to generate frames that are discrete analogues to differential operators of various orders, which will help avoid stair-casing effects. Instead of denoising each DW image separately, we collaboratively denoise groups of DW images acquired with adjacent gradient directions. In addition, we introduce a very efficient method for solving an ℓ(0) denoising problem that involves only thresholding and solving a trivial inverse problem. We demonstrate the effectiveness of our method qualitatively and quantitatively using synthetic and real data. Public Library of Science 2019-02-06 /pmc/articles/PMC6364918/ /pubmed/30726257 http://dx.doi.org/10.1371/journal.pone.0211621 Text en © 2019 Chen et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Chen, Geng Zhang, Jian Zhang, Yong Dong, Bin Shen, Dinggang Yap, Pew-Thian Multi-channel framelet denoising of diffusion-weighted images |
title | Multi-channel framelet denoising of diffusion-weighted images |
title_full | Multi-channel framelet denoising of diffusion-weighted images |
title_fullStr | Multi-channel framelet denoising of diffusion-weighted images |
title_full_unstemmed | Multi-channel framelet denoising of diffusion-weighted images |
title_short | Multi-channel framelet denoising of diffusion-weighted images |
title_sort | multi-channel framelet denoising of diffusion-weighted images |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6364918/ https://www.ncbi.nlm.nih.gov/pubmed/30726257 http://dx.doi.org/10.1371/journal.pone.0211621 |
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