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Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment

An extracellular thermo-alkali stable chitinase was obtained from Streptomyces chilikensis RC1830, a novel actinobacterial strain isolated from the sediments of Chilika lake, India. Purification of the enzyme was carried out by concentrating the enzyme with centrifugal device followed by chromatogra...

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Autores principales: Ray, Lopamudra, Panda, Ananta Narayan, Mishra, Samir Ranjan, Pattanaik, Ajit Kumar, Adhya, Tapan Kumar, Suar, Mrutyunjay, Raina, Vishakha
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Elsevier 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365541/
https://www.ncbi.nlm.nih.gov/pubmed/30775271
http://dx.doi.org/10.1016/j.btre.2019.e00311
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author Ray, Lopamudra
Panda, Ananta Narayan
Mishra, Samir Ranjan
Pattanaik, Ajit Kumar
Adhya, Tapan Kumar
Suar, Mrutyunjay
Raina, Vishakha
author_facet Ray, Lopamudra
Panda, Ananta Narayan
Mishra, Samir Ranjan
Pattanaik, Ajit Kumar
Adhya, Tapan Kumar
Suar, Mrutyunjay
Raina, Vishakha
author_sort Ray, Lopamudra
collection PubMed
description An extracellular thermo-alkali stable chitinase was obtained from Streptomyces chilikensis RC1830, a novel actinobacterial strain isolated from the sediments of Chilika lake, India. Purification of the enzyme was carried out by concentrating the enzyme with centrifugal device followed by chromatographic separation by DEAE Sepharose ion exchange resin.The molecular weight of the enzyme was 10.5 kDa as determined by SDS-PAGE. The optimum pH and temperature for the partially purified chitinase was pH 7 and 60 °C. The chitinase showed 40% activity at pH 11 after 24 h exposure at room temperature. The chitinase exhibited Km and Vmax values are 0.02 mM and 3.184 mol/min/mg of enzyme respectively. The 6 residue N-terminal sequence of the enzyme was not found similar to any of the reported chitinase enzyme. Based on the SDS PAGE, zymogram analysis, activity assays and other characteristics, it is proposed that the purified enzyme from S.chilikensis RC1830 is a chitinase.
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spelling pubmed-63655412019-02-15 Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment Ray, Lopamudra Panda, Ananta Narayan Mishra, Samir Ranjan Pattanaik, Ajit Kumar Adhya, Tapan Kumar Suar, Mrutyunjay Raina, Vishakha Biotechnol Rep (Amst) Article An extracellular thermo-alkali stable chitinase was obtained from Streptomyces chilikensis RC1830, a novel actinobacterial strain isolated from the sediments of Chilika lake, India. Purification of the enzyme was carried out by concentrating the enzyme with centrifugal device followed by chromatographic separation by DEAE Sepharose ion exchange resin.The molecular weight of the enzyme was 10.5 kDa as determined by SDS-PAGE. The optimum pH and temperature for the partially purified chitinase was pH 7 and 60 °C. The chitinase showed 40% activity at pH 11 after 24 h exposure at room temperature. The chitinase exhibited Km and Vmax values are 0.02 mM and 3.184 mol/min/mg of enzyme respectively. The 6 residue N-terminal sequence of the enzyme was not found similar to any of the reported chitinase enzyme. Based on the SDS PAGE, zymogram analysis, activity assays and other characteristics, it is proposed that the purified enzyme from S.chilikensis RC1830 is a chitinase. Elsevier 2019-01-29 /pmc/articles/PMC6365541/ /pubmed/30775271 http://dx.doi.org/10.1016/j.btre.2019.e00311 Text en © 2019 Published by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/).
spellingShingle Article
Ray, Lopamudra
Panda, Ananta Narayan
Mishra, Samir Ranjan
Pattanaik, Ajit Kumar
Adhya, Tapan Kumar
Suar, Mrutyunjay
Raina, Vishakha
Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
title Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
title_full Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
title_fullStr Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
title_full_unstemmed Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
title_short Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
title_sort purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from streptomyces chilikensis rc1830 isolated from a brackish water lake sediment
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365541/
https://www.ncbi.nlm.nih.gov/pubmed/30775271
http://dx.doi.org/10.1016/j.btre.2019.e00311
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