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Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment
An extracellular thermo-alkali stable chitinase was obtained from Streptomyces chilikensis RC1830, a novel actinobacterial strain isolated from the sediments of Chilika lake, India. Purification of the enzyme was carried out by concentrating the enzyme with centrifugal device followed by chromatogra...
Autores principales: | , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Elsevier
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365541/ https://www.ncbi.nlm.nih.gov/pubmed/30775271 http://dx.doi.org/10.1016/j.btre.2019.e00311 |
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author | Ray, Lopamudra Panda, Ananta Narayan Mishra, Samir Ranjan Pattanaik, Ajit Kumar Adhya, Tapan Kumar Suar, Mrutyunjay Raina, Vishakha |
author_facet | Ray, Lopamudra Panda, Ananta Narayan Mishra, Samir Ranjan Pattanaik, Ajit Kumar Adhya, Tapan Kumar Suar, Mrutyunjay Raina, Vishakha |
author_sort | Ray, Lopamudra |
collection | PubMed |
description | An extracellular thermo-alkali stable chitinase was obtained from Streptomyces chilikensis RC1830, a novel actinobacterial strain isolated from the sediments of Chilika lake, India. Purification of the enzyme was carried out by concentrating the enzyme with centrifugal device followed by chromatographic separation by DEAE Sepharose ion exchange resin.The molecular weight of the enzyme was 10.5 kDa as determined by SDS-PAGE. The optimum pH and temperature for the partially purified chitinase was pH 7 and 60 °C. The chitinase showed 40% activity at pH 11 after 24 h exposure at room temperature. The chitinase exhibited Km and Vmax values are 0.02 mM and 3.184 mol/min/mg of enzyme respectively. The 6 residue N-terminal sequence of the enzyme was not found similar to any of the reported chitinase enzyme. Based on the SDS PAGE, zymogram analysis, activity assays and other characteristics, it is proposed that the purified enzyme from S.chilikensis RC1830 is a chitinase. |
format | Online Article Text |
id | pubmed-6365541 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-63655412019-02-15 Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment Ray, Lopamudra Panda, Ananta Narayan Mishra, Samir Ranjan Pattanaik, Ajit Kumar Adhya, Tapan Kumar Suar, Mrutyunjay Raina, Vishakha Biotechnol Rep (Amst) Article An extracellular thermo-alkali stable chitinase was obtained from Streptomyces chilikensis RC1830, a novel actinobacterial strain isolated from the sediments of Chilika lake, India. Purification of the enzyme was carried out by concentrating the enzyme with centrifugal device followed by chromatographic separation by DEAE Sepharose ion exchange resin.The molecular weight of the enzyme was 10.5 kDa as determined by SDS-PAGE. The optimum pH and temperature for the partially purified chitinase was pH 7 and 60 °C. The chitinase showed 40% activity at pH 11 after 24 h exposure at room temperature. The chitinase exhibited Km and Vmax values are 0.02 mM and 3.184 mol/min/mg of enzyme respectively. The 6 residue N-terminal sequence of the enzyme was not found similar to any of the reported chitinase enzyme. Based on the SDS PAGE, zymogram analysis, activity assays and other characteristics, it is proposed that the purified enzyme from S.chilikensis RC1830 is a chitinase. Elsevier 2019-01-29 /pmc/articles/PMC6365541/ /pubmed/30775271 http://dx.doi.org/10.1016/j.btre.2019.e00311 Text en © 2019 Published by Elsevier B.V. http://creativecommons.org/licenses/by-nc-nd/4.0/ This is an open access article under the CC BY-NC-ND license (http://creativecommons.org/licenses/by-nc-nd/4.0/). |
spellingShingle | Article Ray, Lopamudra Panda, Ananta Narayan Mishra, Samir Ranjan Pattanaik, Ajit Kumar Adhya, Tapan Kumar Suar, Mrutyunjay Raina, Vishakha Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment |
title | Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment |
title_full | Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment |
title_fullStr | Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment |
title_full_unstemmed | Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment |
title_short | Purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from Streptomyces chilikensis RC1830 isolated from a brackish water lake sediment |
title_sort | purification and characterization of an extracellular thermo-alkali stable, metal tolerant chitinase from streptomyces chilikensis rc1830 isolated from a brackish water lake sediment |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6365541/ https://www.ncbi.nlm.nih.gov/pubmed/30775271 http://dx.doi.org/10.1016/j.btre.2019.e00311 |
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