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An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends...
Autores principales: | , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366704/ https://www.ncbi.nlm.nih.gov/pubmed/30730979 http://dx.doi.org/10.1371/journal.pone.0212003 |
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author | Ledien, Julia Souv, Kimsan Leang, Rithea Huy, Rekol Cousien, Anthony Peas, Muslim Froehlich, Yves Duboz, Raphaël Ong, Sivuth Duong, Veasna Buchy, Philippe Dussart, Philippe Tarantola, Arnaud |
author_facet | Ledien, Julia Souv, Kimsan Leang, Rithea Huy, Rekol Cousien, Anthony Peas, Muslim Froehlich, Yves Duboz, Raphaël Ong, Sivuth Duong, Veasna Buchy, Philippe Dussart, Philippe Tarantola, Arnaud |
author_sort | Ledien, Julia |
collection | PubMed |
description | Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends but the sensitivity of the early warning and time-lag to usefully inform hospitals can be improved. During The ECOnomic development, ECOsystem MOdifications, and emerging infectious diseases Risk Evaluation (ECOMORE) project’s knowledge translation platforms, Cambodian hospital staff requested an early warning tool to prepare for major outbreaks. Our objective was therefore to find adapted tools to improve the early warning system and preparedness. Dengue data was provided by the National Dengue Control Program (NDCP) and are routinely obtained through passive surveillance. The data were analyzed at the provincial level for eight Cambodian provinces during 2008–2015. The R surveillance package was used for the analysis. We evaluated the effectiveness of Bayesian algorithms to detect outbreaks using count data series, comparing the current count to an expected distribution obtained from observations of past years. The analyses bore on 78,759 patients with dengue-like syndromes. The algorithm maximizing sensitivity and specificity for the detection of major dengue outbreaks was selected in each province. The overall sensitivity and specificity were 73% and 97%, respectively, for the detection of significant outbreaks during 2008–2015. Depending on the province, sensitivity and specificity ranged from 50% to 100% and 75% to 100%, respectively. The final algorithm meets clinicians’ and decisionmakers’ needs, is cost-free and is easy to implement at the provincial level. |
format | Online Article Text |
id | pubmed-6366704 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-63667042019-02-22 An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia Ledien, Julia Souv, Kimsan Leang, Rithea Huy, Rekol Cousien, Anthony Peas, Muslim Froehlich, Yves Duboz, Raphaël Ong, Sivuth Duong, Veasna Buchy, Philippe Dussart, Philippe Tarantola, Arnaud PLoS One Research Article Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends but the sensitivity of the early warning and time-lag to usefully inform hospitals can be improved. During The ECOnomic development, ECOsystem MOdifications, and emerging infectious diseases Risk Evaluation (ECOMORE) project’s knowledge translation platforms, Cambodian hospital staff requested an early warning tool to prepare for major outbreaks. Our objective was therefore to find adapted tools to improve the early warning system and preparedness. Dengue data was provided by the National Dengue Control Program (NDCP) and are routinely obtained through passive surveillance. The data were analyzed at the provincial level for eight Cambodian provinces during 2008–2015. The R surveillance package was used for the analysis. We evaluated the effectiveness of Bayesian algorithms to detect outbreaks using count data series, comparing the current count to an expected distribution obtained from observations of past years. The analyses bore on 78,759 patients with dengue-like syndromes. The algorithm maximizing sensitivity and specificity for the detection of major dengue outbreaks was selected in each province. The overall sensitivity and specificity were 73% and 97%, respectively, for the detection of significant outbreaks during 2008–2015. Depending on the province, sensitivity and specificity ranged from 50% to 100% and 75% to 100%, respectively. The final algorithm meets clinicians’ and decisionmakers’ needs, is cost-free and is easy to implement at the provincial level. Public Library of Science 2019-02-07 /pmc/articles/PMC6366704/ /pubmed/30730979 http://dx.doi.org/10.1371/journal.pone.0212003 Text en © 2019 Ledien et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Ledien, Julia Souv, Kimsan Leang, Rithea Huy, Rekol Cousien, Anthony Peas, Muslim Froehlich, Yves Duboz, Raphaël Ong, Sivuth Duong, Veasna Buchy, Philippe Dussart, Philippe Tarantola, Arnaud An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia |
title | An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia |
title_full | An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia |
title_fullStr | An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia |
title_full_unstemmed | An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia |
title_short | An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia |
title_sort | algorithm applied to national surveillance data for the early detection of major dengue outbreaks in cambodia |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366704/ https://www.ncbi.nlm.nih.gov/pubmed/30730979 http://dx.doi.org/10.1371/journal.pone.0212003 |
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