Cargando…

An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia

Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends...

Descripción completa

Detalles Bibliográficos
Autores principales: Ledien, Julia, Souv, Kimsan, Leang, Rithea, Huy, Rekol, Cousien, Anthony, Peas, Muslim, Froehlich, Yves, Duboz, Raphaël, Ong, Sivuth, Duong, Veasna, Buchy, Philippe, Dussart, Philippe, Tarantola, Arnaud
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366704/
https://www.ncbi.nlm.nih.gov/pubmed/30730979
http://dx.doi.org/10.1371/journal.pone.0212003
_version_ 1783393647381708800
author Ledien, Julia
Souv, Kimsan
Leang, Rithea
Huy, Rekol
Cousien, Anthony
Peas, Muslim
Froehlich, Yves
Duboz, Raphaël
Ong, Sivuth
Duong, Veasna
Buchy, Philippe
Dussart, Philippe
Tarantola, Arnaud
author_facet Ledien, Julia
Souv, Kimsan
Leang, Rithea
Huy, Rekol
Cousien, Anthony
Peas, Muslim
Froehlich, Yves
Duboz, Raphaël
Ong, Sivuth
Duong, Veasna
Buchy, Philippe
Dussart, Philippe
Tarantola, Arnaud
author_sort Ledien, Julia
collection PubMed
description Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends but the sensitivity of the early warning and time-lag to usefully inform hospitals can be improved. During The ECOnomic development, ECOsystem MOdifications, and emerging infectious diseases Risk Evaluation (ECOMORE) project’s knowledge translation platforms, Cambodian hospital staff requested an early warning tool to prepare for major outbreaks. Our objective was therefore to find adapted tools to improve the early warning system and preparedness. Dengue data was provided by the National Dengue Control Program (NDCP) and are routinely obtained through passive surveillance. The data were analyzed at the provincial level for eight Cambodian provinces during 2008–2015. The R surveillance package was used for the analysis. We evaluated the effectiveness of Bayesian algorithms to detect outbreaks using count data series, comparing the current count to an expected distribution obtained from observations of past years. The analyses bore on 78,759 patients with dengue-like syndromes. The algorithm maximizing sensitivity and specificity for the detection of major dengue outbreaks was selected in each province. The overall sensitivity and specificity were 73% and 97%, respectively, for the detection of significant outbreaks during 2008–2015. Depending on the province, sensitivity and specificity ranged from 50% to 100% and 75% to 100%, respectively. The final algorithm meets clinicians’ and decisionmakers’ needs, is cost-free and is easy to implement at the provincial level.
format Online
Article
Text
id pubmed-6366704
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Public Library of Science
record_format MEDLINE/PubMed
spelling pubmed-63667042019-02-22 An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia Ledien, Julia Souv, Kimsan Leang, Rithea Huy, Rekol Cousien, Anthony Peas, Muslim Froehlich, Yves Duboz, Raphaël Ong, Sivuth Duong, Veasna Buchy, Philippe Dussart, Philippe Tarantola, Arnaud PLoS One Research Article Dengue is a national priority disease in Cambodia. The Cambodian National Dengue Surveillance System is based on passive surveillance of dengue-like inpatients reported by public hospitals and on a sentinel, pediatric hospital-based active surveillance system. This system works well to assess trends but the sensitivity of the early warning and time-lag to usefully inform hospitals can be improved. During The ECOnomic development, ECOsystem MOdifications, and emerging infectious diseases Risk Evaluation (ECOMORE) project’s knowledge translation platforms, Cambodian hospital staff requested an early warning tool to prepare for major outbreaks. Our objective was therefore to find adapted tools to improve the early warning system and preparedness. Dengue data was provided by the National Dengue Control Program (NDCP) and are routinely obtained through passive surveillance. The data were analyzed at the provincial level for eight Cambodian provinces during 2008–2015. The R surveillance package was used for the analysis. We evaluated the effectiveness of Bayesian algorithms to detect outbreaks using count data series, comparing the current count to an expected distribution obtained from observations of past years. The analyses bore on 78,759 patients with dengue-like syndromes. The algorithm maximizing sensitivity and specificity for the detection of major dengue outbreaks was selected in each province. The overall sensitivity and specificity were 73% and 97%, respectively, for the detection of significant outbreaks during 2008–2015. Depending on the province, sensitivity and specificity ranged from 50% to 100% and 75% to 100%, respectively. The final algorithm meets clinicians’ and decisionmakers’ needs, is cost-free and is easy to implement at the provincial level. Public Library of Science 2019-02-07 /pmc/articles/PMC6366704/ /pubmed/30730979 http://dx.doi.org/10.1371/journal.pone.0212003 Text en © 2019 Ledien et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Ledien, Julia
Souv, Kimsan
Leang, Rithea
Huy, Rekol
Cousien, Anthony
Peas, Muslim
Froehlich, Yves
Duboz, Raphaël
Ong, Sivuth
Duong, Veasna
Buchy, Philippe
Dussart, Philippe
Tarantola, Arnaud
An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
title An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
title_full An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
title_fullStr An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
title_full_unstemmed An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
title_short An algorithm applied to national surveillance data for the early detection of major dengue outbreaks in Cambodia
title_sort algorithm applied to national surveillance data for the early detection of major dengue outbreaks in cambodia
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366704/
https://www.ncbi.nlm.nih.gov/pubmed/30730979
http://dx.doi.org/10.1371/journal.pone.0212003
work_keys_str_mv AT ledienjulia analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT souvkimsan analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT leangrithea analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT huyrekol analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT cousienanthony analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT peasmuslim analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT froehlichyves analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT dubozraphael analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT ongsivuth analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT duongveasna analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT buchyphilippe analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT dussartphilippe analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT tarantolaarnaud analgorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT ledienjulia algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT souvkimsan algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT leangrithea algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT huyrekol algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT cousienanthony algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT peasmuslim algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT froehlichyves algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT dubozraphael algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT ongsivuth algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT duongveasna algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT buchyphilippe algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT dussartphilippe algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia
AT tarantolaarnaud algorithmappliedtonationalsurveillancedatafortheearlydetectionofmajordengueoutbreaksincambodia