Cargando…

IDH mutation-specific radiomic signature in lower-grade gliomas

Unravelling the heterogeneity is the central challenge for glioma precession oncology. In this study, we extracted quantitative image features from T2-weighted MR images and revealed that the isocitrate dehydrogenase (IDH) wild type and mutant lower grade gliomas (LGGs) differed in their expression...

Descripción completa

Detalles Bibliográficos
Autores principales: Liu, Xing, Li, Yiming, Li, Shaowu, Fan, Xing, Sun, Zhiyan, Yang, Zhengyi, Wang, Kai, Zhang, Zhong, Jiang, Tao, Liu, Yong, Wang, Lei, Wang, Yinyan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366985/
https://www.ncbi.nlm.nih.gov/pubmed/30696801
http://dx.doi.org/10.18632/aging.101769
_version_ 1783393704857305088
author Liu, Xing
Li, Yiming
Li, Shaowu
Fan, Xing
Sun, Zhiyan
Yang, Zhengyi
Wang, Kai
Zhang, Zhong
Jiang, Tao
Liu, Yong
Wang, Lei
Wang, Yinyan
author_facet Liu, Xing
Li, Yiming
Li, Shaowu
Fan, Xing
Sun, Zhiyan
Yang, Zhengyi
Wang, Kai
Zhang, Zhong
Jiang, Tao
Liu, Yong
Wang, Lei
Wang, Yinyan
author_sort Liu, Xing
collection PubMed
description Unravelling the heterogeneity is the central challenge for glioma precession oncology. In this study, we extracted quantitative image features from T2-weighted MR images and revealed that the isocitrate dehydrogenase (IDH) wild type and mutant lower grade gliomas (LGGs) differed in their expression of 146 radiomic descriptors. The logistic regression model algorithm further reduced these to 86 features. The classification model could discriminate the two types in both the training and validation sets with area under the curve values of 1.0000 and 0.9932, respectively. The transcriptome-radiomic analysis revealed that these features were associated with the immune response, biological adhesion, and several malignant behaviors, all of which are consistent with biological processes that are differentially expressed in IDH wild type and IDH mutant LGGs. Finally, a prognostic signature showed an ability to stratify IDH mutant LGGs into high and low risk groups with distinctive outcomes. By extracting a large number of radiomic features, we identified an IDH mutation-specific radiomic signature with prognostic implications. This radiomic signature may provide a way to non-invasively discriminate lower-grade gliomas as with or without the IDH mutation.
format Online
Article
Text
id pubmed-6366985
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Impact Journals
record_format MEDLINE/PubMed
spelling pubmed-63669852019-02-15 IDH mutation-specific radiomic signature in lower-grade gliomas Liu, Xing Li, Yiming Li, Shaowu Fan, Xing Sun, Zhiyan Yang, Zhengyi Wang, Kai Zhang, Zhong Jiang, Tao Liu, Yong Wang, Lei Wang, Yinyan Aging (Albany NY) Research Paper Unravelling the heterogeneity is the central challenge for glioma precession oncology. In this study, we extracted quantitative image features from T2-weighted MR images and revealed that the isocitrate dehydrogenase (IDH) wild type and mutant lower grade gliomas (LGGs) differed in their expression of 146 radiomic descriptors. The logistic regression model algorithm further reduced these to 86 features. The classification model could discriminate the two types in both the training and validation sets with area under the curve values of 1.0000 and 0.9932, respectively. The transcriptome-radiomic analysis revealed that these features were associated with the immune response, biological adhesion, and several malignant behaviors, all of which are consistent with biological processes that are differentially expressed in IDH wild type and IDH mutant LGGs. Finally, a prognostic signature showed an ability to stratify IDH mutant LGGs into high and low risk groups with distinctive outcomes. By extracting a large number of radiomic features, we identified an IDH mutation-specific radiomic signature with prognostic implications. This radiomic signature may provide a way to non-invasively discriminate lower-grade gliomas as with or without the IDH mutation. Impact Journals 2019-01-29 /pmc/articles/PMC6366985/ /pubmed/30696801 http://dx.doi.org/10.18632/aging.101769 Text en Copyright: © 2019 Liu et al. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Liu, Xing
Li, Yiming
Li, Shaowu
Fan, Xing
Sun, Zhiyan
Yang, Zhengyi
Wang, Kai
Zhang, Zhong
Jiang, Tao
Liu, Yong
Wang, Lei
Wang, Yinyan
IDH mutation-specific radiomic signature in lower-grade gliomas
title IDH mutation-specific radiomic signature in lower-grade gliomas
title_full IDH mutation-specific radiomic signature in lower-grade gliomas
title_fullStr IDH mutation-specific radiomic signature in lower-grade gliomas
title_full_unstemmed IDH mutation-specific radiomic signature in lower-grade gliomas
title_short IDH mutation-specific radiomic signature in lower-grade gliomas
title_sort idh mutation-specific radiomic signature in lower-grade gliomas
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6366985/
https://www.ncbi.nlm.nih.gov/pubmed/30696801
http://dx.doi.org/10.18632/aging.101769
work_keys_str_mv AT liuxing idhmutationspecificradiomicsignatureinlowergradegliomas
AT liyiming idhmutationspecificradiomicsignatureinlowergradegliomas
AT lishaowu idhmutationspecificradiomicsignatureinlowergradegliomas
AT fanxing idhmutationspecificradiomicsignatureinlowergradegliomas
AT sunzhiyan idhmutationspecificradiomicsignatureinlowergradegliomas
AT yangzhengyi idhmutationspecificradiomicsignatureinlowergradegliomas
AT wangkai idhmutationspecificradiomicsignatureinlowergradegliomas
AT zhangzhong idhmutationspecificradiomicsignatureinlowergradegliomas
AT jiangtao idhmutationspecificradiomicsignatureinlowergradegliomas
AT liuyong idhmutationspecificradiomicsignatureinlowergradegliomas
AT wanglei idhmutationspecificradiomicsignatureinlowergradegliomas
AT wangyinyan idhmutationspecificradiomicsignatureinlowergradegliomas