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Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
Pseudomonas cichorii, which causes varnish spots on lettuce and seriously damages lettuce production during the summer season in the highland areas of Japan (e.g., Nagano and Iwate prefectures) was isolated. The structure of a toxin produced by this organism was analyzed based on the detailed evalua...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Beilstein-Institut
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369977/ https://www.ncbi.nlm.nih.gov/pubmed/30800180 http://dx.doi.org/10.3762/bjoc.15.27 |
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author | Komatsu, Hidekazu Shirakawa, Takashi Uchiyama, Takeo Hoshino, Tsutomu |
author_facet | Komatsu, Hidekazu Shirakawa, Takashi Uchiyama, Takeo Hoshino, Tsutomu |
author_sort | Komatsu, Hidekazu |
collection | PubMed |
description | Pseudomonas cichorii, which causes varnish spots on lettuce and seriously damages lettuce production during the summer season in the highland areas of Japan (e.g., Nagano and Iwate prefectures) was isolated. The structure of a toxin produced by this organism was analyzed based on the detailed evaluation of its 2D NMR and FABMS spectra, and this compound has not been reported previously. We propose the name cichorinotoxin for this toxin. In conjunction with the D or L configurations of each amino acid, which were determined by Marfey’s method, we propose the structure of cichorinotoxin to be as follows: 3-hydroxydecanoyl-(Z)-dhThr(1)-D-Pro(2)-D-Ala(3)-D-Ala(4)-D-Ala(5)-D-Val(6)-D-Ala(7)-(Z)-dhThr(8)-Ala(9)-Val(10)-D-Ile(11)-Ser(12)-Ala(13)-Val(14)-Ala(15)-Val(16)-(Z)-dhThr(17)-D-alloThr(18)-Ala(19)-L-Dab(20)-Ser(21)-Val(22), and an ester linkage is present between D-alloThr(18) and Val(22) (dhThr: 2-aminobut-2-enoic acid; Dab: 2,4-diaminobutanoic acid). Thus, the toxin is a lipodepsipeptide with 22 amino acids. The mono- and tetraacetate derivatives and two alkaline hydrolysates, compounds A and B, were prepared. We discuss here the structure–activity relationships between the derivatives and their necrotic activities toward lettuce. |
format | Online Article Text |
id | pubmed-6369977 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Beilstein-Institut |
record_format | MEDLINE/PubMed |
spelling | pubmed-63699772019-02-22 Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce Komatsu, Hidekazu Shirakawa, Takashi Uchiyama, Takeo Hoshino, Tsutomu Beilstein J Org Chem Full Research Paper Pseudomonas cichorii, which causes varnish spots on lettuce and seriously damages lettuce production during the summer season in the highland areas of Japan (e.g., Nagano and Iwate prefectures) was isolated. The structure of a toxin produced by this organism was analyzed based on the detailed evaluation of its 2D NMR and FABMS spectra, and this compound has not been reported previously. We propose the name cichorinotoxin for this toxin. In conjunction with the D or L configurations of each amino acid, which were determined by Marfey’s method, we propose the structure of cichorinotoxin to be as follows: 3-hydroxydecanoyl-(Z)-dhThr(1)-D-Pro(2)-D-Ala(3)-D-Ala(4)-D-Ala(5)-D-Val(6)-D-Ala(7)-(Z)-dhThr(8)-Ala(9)-Val(10)-D-Ile(11)-Ser(12)-Ala(13)-Val(14)-Ala(15)-Val(16)-(Z)-dhThr(17)-D-alloThr(18)-Ala(19)-L-Dab(20)-Ser(21)-Val(22), and an ester linkage is present between D-alloThr(18) and Val(22) (dhThr: 2-aminobut-2-enoic acid; Dab: 2,4-diaminobutanoic acid). Thus, the toxin is a lipodepsipeptide with 22 amino acids. The mono- and tetraacetate derivatives and two alkaline hydrolysates, compounds A and B, were prepared. We discuss here the structure–activity relationships between the derivatives and their necrotic activities toward lettuce. Beilstein-Institut 2019-02-01 /pmc/articles/PMC6369977/ /pubmed/30800180 http://dx.doi.org/10.3762/bjoc.15.27 Text en Copyright © 2019, Komatsu et al. https://creativecommons.org/licenses/by/4.0https://www.beilstein-journals.org/bjoc/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0). Please note that the reuse, redistribution and reproduction in particular requires that the authors and source are credited. The license is subject to the Beilstein Journal of Organic Chemistry terms and conditions: (https://www.beilstein-journals.org/bjoc/terms) |
spellingShingle | Full Research Paper Komatsu, Hidekazu Shirakawa, Takashi Uchiyama, Takeo Hoshino, Tsutomu Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce |
title | Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce |
title_full | Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce |
title_fullStr | Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce |
title_full_unstemmed | Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce |
title_short | Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce |
title_sort | chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by pseudomonas cichorii and causes varnish spots on lettuce |
topic | Full Research Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369977/ https://www.ncbi.nlm.nih.gov/pubmed/30800180 http://dx.doi.org/10.3762/bjoc.15.27 |
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