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Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce

Pseudomonas cichorii, which causes varnish spots on lettuce and seriously damages lettuce production during the summer season in the highland areas of Japan (e.g., Nagano and Iwate prefectures) was isolated. The structure of a toxin produced by this organism was analyzed based on the detailed evalua...

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Autores principales: Komatsu, Hidekazu, Shirakawa, Takashi, Uchiyama, Takeo, Hoshino, Tsutomu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Beilstein-Institut 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369977/
https://www.ncbi.nlm.nih.gov/pubmed/30800180
http://dx.doi.org/10.3762/bjoc.15.27
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author Komatsu, Hidekazu
Shirakawa, Takashi
Uchiyama, Takeo
Hoshino, Tsutomu
author_facet Komatsu, Hidekazu
Shirakawa, Takashi
Uchiyama, Takeo
Hoshino, Tsutomu
author_sort Komatsu, Hidekazu
collection PubMed
description Pseudomonas cichorii, which causes varnish spots on lettuce and seriously damages lettuce production during the summer season in the highland areas of Japan (e.g., Nagano and Iwate prefectures) was isolated. The structure of a toxin produced by this organism was analyzed based on the detailed evaluation of its 2D NMR and FABMS spectra, and this compound has not been reported previously. We propose the name cichorinotoxin for this toxin. In conjunction with the D or L configurations of each amino acid, which were determined by Marfey’s method, we propose the structure of cichorinotoxin to be as follows: 3-hydroxydecanoyl-(Z)-dhThr(1)-D-Pro(2)-D-Ala(3)-D-Ala(4)-D-Ala(5)-D-Val(6)-D-Ala(7)-(Z)-dhThr(8)-Ala(9)-Val(10)-D-Ile(11)-Ser(12)-Ala(13)-Val(14)-Ala(15)-Val(16)-(Z)-dhThr(17)-D-alloThr(18)-Ala(19)-L-Dab(20)-Ser(21)-Val(22), and an ester linkage is present between D-alloThr(18) and Val(22) (dhThr: 2-aminobut-2-enoic acid; Dab: 2,4-diaminobutanoic acid). Thus, the toxin is a lipodepsipeptide with 22 amino acids. The mono- and tetraacetate derivatives and two alkaline hydrolysates, compounds A and B, were prepared. We discuss here the structure–activity relationships between the derivatives and their necrotic activities toward lettuce.
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spelling pubmed-63699772019-02-22 Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce Komatsu, Hidekazu Shirakawa, Takashi Uchiyama, Takeo Hoshino, Tsutomu Beilstein J Org Chem Full Research Paper Pseudomonas cichorii, which causes varnish spots on lettuce and seriously damages lettuce production during the summer season in the highland areas of Japan (e.g., Nagano and Iwate prefectures) was isolated. The structure of a toxin produced by this organism was analyzed based on the detailed evaluation of its 2D NMR and FABMS spectra, and this compound has not been reported previously. We propose the name cichorinotoxin for this toxin. In conjunction with the D or L configurations of each amino acid, which were determined by Marfey’s method, we propose the structure of cichorinotoxin to be as follows: 3-hydroxydecanoyl-(Z)-dhThr(1)-D-Pro(2)-D-Ala(3)-D-Ala(4)-D-Ala(5)-D-Val(6)-D-Ala(7)-(Z)-dhThr(8)-Ala(9)-Val(10)-D-Ile(11)-Ser(12)-Ala(13)-Val(14)-Ala(15)-Val(16)-(Z)-dhThr(17)-D-alloThr(18)-Ala(19)-L-Dab(20)-Ser(21)-Val(22), and an ester linkage is present between D-alloThr(18) and Val(22) (dhThr: 2-aminobut-2-enoic acid; Dab: 2,4-diaminobutanoic acid). Thus, the toxin is a lipodepsipeptide with 22 amino acids. The mono- and tetraacetate derivatives and two alkaline hydrolysates, compounds A and B, were prepared. We discuss here the structure–activity relationships between the derivatives and their necrotic activities toward lettuce. Beilstein-Institut 2019-02-01 /pmc/articles/PMC6369977/ /pubmed/30800180 http://dx.doi.org/10.3762/bjoc.15.27 Text en Copyright © 2019, Komatsu et al. https://creativecommons.org/licenses/by/4.0https://www.beilstein-journals.org/bjoc/termsThis is an Open Access article under the terms of the Creative Commons Attribution License (https://creativecommons.org/licenses/by/4.0). Please note that the reuse, redistribution and reproduction in particular requires that the authors and source are credited. The license is subject to the Beilstein Journal of Organic Chemistry terms and conditions: (https://www.beilstein-journals.org/bjoc/terms)
spellingShingle Full Research Paper
Komatsu, Hidekazu
Shirakawa, Takashi
Uchiyama, Takeo
Hoshino, Tsutomu
Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
title Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
title_full Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
title_fullStr Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
title_full_unstemmed Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
title_short Chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by Pseudomonas cichorii and causes varnish spots on lettuce
title_sort chemical structure of cichorinotoxin, a cyclic lipodepsipeptide that is produced by pseudomonas cichorii and causes varnish spots on lettuce
topic Full Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6369977/
https://www.ncbi.nlm.nih.gov/pubmed/30800180
http://dx.doi.org/10.3762/bjoc.15.27
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