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Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment

BACKGROUND/AIMS: Trachoma programs base treatment decisions on the community prevalence of the clinical signs of trachoma, assessed by direct examination of the conjunctiva. Automated assessment could be more standardized and more cost-effective. We tested the hypothesis that an automated algorithm...

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Autores principales: Kim, Matthew C., Okada, Kazunori, Ryner, Alexander M., Amza, Abdou, Tadesse, Zerihun, Cotter, Sun Y., Gaynor, Bruce D., Keenan, Jeremy D., Lietman, Thomas M., Porco, Travis C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6370195/
https://www.ncbi.nlm.nih.gov/pubmed/30742639
http://dx.doi.org/10.1371/journal.pone.0210463
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author Kim, Matthew C.
Okada, Kazunori
Ryner, Alexander M.
Amza, Abdou
Tadesse, Zerihun
Cotter, Sun Y.
Gaynor, Bruce D.
Keenan, Jeremy D.
Lietman, Thomas M.
Porco, Travis C.
author_facet Kim, Matthew C.
Okada, Kazunori
Ryner, Alexander M.
Amza, Abdou
Tadesse, Zerihun
Cotter, Sun Y.
Gaynor, Bruce D.
Keenan, Jeremy D.
Lietman, Thomas M.
Porco, Travis C.
author_sort Kim, Matthew C.
collection PubMed
description BACKGROUND/AIMS: Trachoma programs base treatment decisions on the community prevalence of the clinical signs of trachoma, assessed by direct examination of the conjunctiva. Automated assessment could be more standardized and more cost-effective. We tested the hypothesis that an automated algorithm could classify eyelid photographs better than chance. METHODS: A total of 1,656 field-collected conjunctival images were obtained from clinical trial participants in Niger and Ethiopia. Images were scored for trachomatous inflammation—follicular (TF) and trachomatous inflammation—intense (TI) according to the simplified World Health Organization grading system by expert raters. We developed an automated procedure for image enhancement followed by application of a convolutional neural net classifier for TF and separately for TI. One hundred images were selected for testing TF and TI, and these images were not used for training. RESULTS: The agreement score for TF and TI tasks for the automated algorithm relative to expert graders was κ = 0.44 (95% CI: 0.26 to 0.62, P < 0.001) and κ = 0.69 (95% CI: 0.55 to 0.84, P < 0.001), respectively. DISCUSSION: For assessing the clinical signs of trachoma, a convolutional neural net performed well above chance when tested against expert consensus. Further improvements in specificity may render this method suitable for field use.
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spelling pubmed-63701952019-02-22 Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment Kim, Matthew C. Okada, Kazunori Ryner, Alexander M. Amza, Abdou Tadesse, Zerihun Cotter, Sun Y. Gaynor, Bruce D. Keenan, Jeremy D. Lietman, Thomas M. Porco, Travis C. PLoS One Research Article BACKGROUND/AIMS: Trachoma programs base treatment decisions on the community prevalence of the clinical signs of trachoma, assessed by direct examination of the conjunctiva. Automated assessment could be more standardized and more cost-effective. We tested the hypothesis that an automated algorithm could classify eyelid photographs better than chance. METHODS: A total of 1,656 field-collected conjunctival images were obtained from clinical trial participants in Niger and Ethiopia. Images were scored for trachomatous inflammation—follicular (TF) and trachomatous inflammation—intense (TI) according to the simplified World Health Organization grading system by expert raters. We developed an automated procedure for image enhancement followed by application of a convolutional neural net classifier for TF and separately for TI. One hundred images were selected for testing TF and TI, and these images were not used for training. RESULTS: The agreement score for TF and TI tasks for the automated algorithm relative to expert graders was κ = 0.44 (95% CI: 0.26 to 0.62, P < 0.001) and κ = 0.69 (95% CI: 0.55 to 0.84, P < 0.001), respectively. DISCUSSION: For assessing the clinical signs of trachoma, a convolutional neural net performed well above chance when tested against expert consensus. Further improvements in specificity may render this method suitable for field use. Public Library of Science 2019-02-11 /pmc/articles/PMC6370195/ /pubmed/30742639 http://dx.doi.org/10.1371/journal.pone.0210463 Text en © 2019 Kim et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Kim, Matthew C.
Okada, Kazunori
Ryner, Alexander M.
Amza, Abdou
Tadesse, Zerihun
Cotter, Sun Y.
Gaynor, Bruce D.
Keenan, Jeremy D.
Lietman, Thomas M.
Porco, Travis C.
Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
title Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
title_full Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
title_fullStr Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
title_full_unstemmed Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
title_short Sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
title_sort sensitivity and specificity of computer vision classification of eyelid photographs for programmatic trachoma assessment
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6370195/
https://www.ncbi.nlm.nih.gov/pubmed/30742639
http://dx.doi.org/10.1371/journal.pone.0210463
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