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Dynamic properties of simulated brain network models and empirical resting-state data
Brain network models (BNMs) have become a promising theoretical framework for simulating signals that are representative of whole-brain activity such as resting-state fMRI. However, it has been difficult to compare the complex brain activity obtained from simulations to empirical data. Previous stud...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MIT Press
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6370489/ https://www.ncbi.nlm.nih.gov/pubmed/30793089 http://dx.doi.org/10.1162/netn_a_00070 |
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author | Kashyap, Amrit Keilholz, Shella |
author_facet | Kashyap, Amrit Keilholz, Shella |
author_sort | Kashyap, Amrit |
collection | PubMed |
description | Brain network models (BNMs) have become a promising theoretical framework for simulating signals that are representative of whole-brain activity such as resting-state fMRI. However, it has been difficult to compare the complex brain activity obtained from simulations to empirical data. Previous studies have used simple metrics to characterize coordination between regions such as functional connectivity. We extend this by applying various different dynamic analysis tools that are currently used to understand empirical resting-state fMRI (rs-fMRI) to the simulated data. We show that certain properties correspond to the structural connectivity input that is shared between the models, and certain dynamic properties relate more to the mathematical description of the brain network model. We conclude that the dynamic properties that explicitly examine patterns of signal as a function of time rather than spatial coordination between different brain regions in the rs-fMRI signal seem to provide the largest contrasts between different BNMs and the unknown empirical dynamical system. Our results will be useful in constraining and developing more realistic simulations of whole-brain activity. |
format | Online Article Text |
id | pubmed-6370489 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MIT Press |
record_format | MEDLINE/PubMed |
spelling | pubmed-63704892019-02-21 Dynamic properties of simulated brain network models and empirical resting-state data Kashyap, Amrit Keilholz, Shella Netw Neurosci Research Articles Brain network models (BNMs) have become a promising theoretical framework for simulating signals that are representative of whole-brain activity such as resting-state fMRI. However, it has been difficult to compare the complex brain activity obtained from simulations to empirical data. Previous studies have used simple metrics to characterize coordination between regions such as functional connectivity. We extend this by applying various different dynamic analysis tools that are currently used to understand empirical resting-state fMRI (rs-fMRI) to the simulated data. We show that certain properties correspond to the structural connectivity input that is shared between the models, and certain dynamic properties relate more to the mathematical description of the brain network model. We conclude that the dynamic properties that explicitly examine patterns of signal as a function of time rather than spatial coordination between different brain regions in the rs-fMRI signal seem to provide the largest contrasts between different BNMs and the unknown empirical dynamical system. Our results will be useful in constraining and developing more realistic simulations of whole-brain activity. MIT Press 2019-02-01 /pmc/articles/PMC6370489/ /pubmed/30793089 http://dx.doi.org/10.1162/netn_a_00070 Text en © 2018 Massachusetts Institute of Technology This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. For a full description of the license, please visit https://creativecommons.org/licenses/by/4.0/legalcode. |
spellingShingle | Research Articles Kashyap, Amrit Keilholz, Shella Dynamic properties of simulated brain network models and empirical resting-state data |
title | Dynamic properties of simulated brain network models and empirical resting-state data |
title_full | Dynamic properties of simulated brain network models and empirical resting-state data |
title_fullStr | Dynamic properties of simulated brain network models and empirical resting-state data |
title_full_unstemmed | Dynamic properties of simulated brain network models and empirical resting-state data |
title_short | Dynamic properties of simulated brain network models and empirical resting-state data |
title_sort | dynamic properties of simulated brain network models and empirical resting-state data |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6370489/ https://www.ncbi.nlm.nih.gov/pubmed/30793089 http://dx.doi.org/10.1162/netn_a_00070 |
work_keys_str_mv | AT kashyapamrit dynamicpropertiesofsimulatedbrainnetworkmodelsandempiricalrestingstatedata AT keilholzshella dynamicpropertiesofsimulatedbrainnetworkmodelsandempiricalrestingstatedata |