Cargando…

Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs

Lake Fryxell, situated in the McMurdo Dry Valleys of Antarctica, is an intriguing aquatic ecosystem because of its perennial ice cover, highly stratified water column, and extreme physicochemical conditions, which collectively restrict lake biodiversity to solely microbial forms. To expand our curre...

Descripción completa

Detalles Bibliográficos
Autores principales: Baker, Jennifer M., Vander Schaaf, Nicole A., Cunningham, Anna M. G., Hang, Anna C., Reeves, Chelsea L., Huffman, Emily R., Riester, Carli J., Madigan, Michael T., Sattley, W. Matthew
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6372545/
https://www.ncbi.nlm.nih.gov/pubmed/30787920
http://dx.doi.org/10.3389/fmicb.2019.00156
_version_ 1783394763722981376
author Baker, Jennifer M.
Vander Schaaf, Nicole A.
Cunningham, Anna M. G.
Hang, Anna C.
Reeves, Chelsea L.
Huffman, Emily R.
Riester, Carli J.
Madigan, Michael T.
Sattley, W. Matthew
author_facet Baker, Jennifer M.
Vander Schaaf, Nicole A.
Cunningham, Anna M. G.
Hang, Anna C.
Reeves, Chelsea L.
Huffman, Emily R.
Riester, Carli J.
Madigan, Michael T.
Sattley, W. Matthew
author_sort Baker, Jennifer M.
collection PubMed
description Lake Fryxell, situated in the McMurdo Dry Valleys of Antarctica, is an intriguing aquatic ecosystem because of its perennial ice cover, highly stratified water column, and extreme physicochemical conditions, which collectively restrict lake biodiversity to solely microbial forms. To expand our current understanding of the cultivable biodiversity of Lake Fryxell, water samples were collected from depths of 10 and 17 m, and pure cultures of eight diverse strains of aerobic, chemoorganotrophic bacteria were obtained. Despite having high 16S rRNA gene sequence similarity to mesophilic bacteria inhabiting various temperate environments, all Lake Fryxell isolates were psychrotolerant, with growth occurring at 0°C and optimal growth from 18–24°C for all isolates. Phylogenetic analyses showed the isolates to be members of six taxonomic groups, including the genera Brevundimonas, Arthrobacter, Sphingobium, Leifsonia, and Pseudomonas, as well as the family Microbacteriaceae (one strain could not reliably be assigned to a specific genus based on our analysis). Pseudomonas strain LFY10 stood out as a useful tool for teaching laboratory activities because of its substantial cold adaptation (visible growth is evident in 1–2 days at 4°C), beta-hemolytic activity, and halotolerance to 8.5% (w/v) NaCl. These cold-adapted bacteria likely play a role in carbon mineralization and other nutrient cycling in Lake Fryxell, and their characterization broadens our understanding of microbial biodiversity in aquatic polar ecosystems.
format Online
Article
Text
id pubmed-6372545
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-63725452019-02-20 Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs Baker, Jennifer M. Vander Schaaf, Nicole A. Cunningham, Anna M. G. Hang, Anna C. Reeves, Chelsea L. Huffman, Emily R. Riester, Carli J. Madigan, Michael T. Sattley, W. Matthew Front Microbiol Microbiology Lake Fryxell, situated in the McMurdo Dry Valleys of Antarctica, is an intriguing aquatic ecosystem because of its perennial ice cover, highly stratified water column, and extreme physicochemical conditions, which collectively restrict lake biodiversity to solely microbial forms. To expand our current understanding of the cultivable biodiversity of Lake Fryxell, water samples were collected from depths of 10 and 17 m, and pure cultures of eight diverse strains of aerobic, chemoorganotrophic bacteria were obtained. Despite having high 16S rRNA gene sequence similarity to mesophilic bacteria inhabiting various temperate environments, all Lake Fryxell isolates were psychrotolerant, with growth occurring at 0°C and optimal growth from 18–24°C for all isolates. Phylogenetic analyses showed the isolates to be members of six taxonomic groups, including the genera Brevundimonas, Arthrobacter, Sphingobium, Leifsonia, and Pseudomonas, as well as the family Microbacteriaceae (one strain could not reliably be assigned to a specific genus based on our analysis). Pseudomonas strain LFY10 stood out as a useful tool for teaching laboratory activities because of its substantial cold adaptation (visible growth is evident in 1–2 days at 4°C), beta-hemolytic activity, and halotolerance to 8.5% (w/v) NaCl. These cold-adapted bacteria likely play a role in carbon mineralization and other nutrient cycling in Lake Fryxell, and their characterization broadens our understanding of microbial biodiversity in aquatic polar ecosystems. Frontiers Media S.A. 2019-02-06 /pmc/articles/PMC6372545/ /pubmed/30787920 http://dx.doi.org/10.3389/fmicb.2019.00156 Text en Copyright © 2019 Baker, Vander Schaaf, Cunningham, Hang, Reeves, Huffman, Riester, Madigan and Sattley. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Baker, Jennifer M.
Vander Schaaf, Nicole A.
Cunningham, Anna M. G.
Hang, Anna C.
Reeves, Chelsea L.
Huffman, Emily R.
Riester, Carli J.
Madigan, Michael T.
Sattley, W. Matthew
Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs
title Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs
title_full Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs
title_fullStr Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs
title_full_unstemmed Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs
title_short Chemoorganotrophic Bacteria From Lake Fryxell, Antarctica, Including Pseudomonas Strain LFY10, a Cold-Adapted, Halotolerant Bacterium Useful in Teaching Labs
title_sort chemoorganotrophic bacteria from lake fryxell, antarctica, including pseudomonas strain lfy10, a cold-adapted, halotolerant bacterium useful in teaching labs
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6372545/
https://www.ncbi.nlm.nih.gov/pubmed/30787920
http://dx.doi.org/10.3389/fmicb.2019.00156
work_keys_str_mv AT bakerjenniferm chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT vanderschaafnicolea chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT cunninghamannamg chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT hangannac chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT reeveschelseal chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT huffmanemilyr chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT riestercarlij chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT madiganmichaelt chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs
AT sattleywmatthew chemoorganotrophicbacteriafromlakefryxellantarcticaincludingpseudomonasstrainlfy10acoldadaptedhalotolerantbacteriumusefulinteachinglabs