Cargando…

Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta

Laccase is one of the oldest known and intensively studied fungal enzymes capable of oxidizing recalcitrant lignin-resembling phenolic compounds. It is currently well established that fungal genomes almost always contain several non-allelic copies of laccase genes (laccase multigene families); never...

Descripción completa

Detalles Bibliográficos
Autores principales: Savinova, Olga S., Moiseenko, Konstantin V., Vavilova, Ekaterina A., Chulkin, Andrey M., Fedorova, Tatiana V., Tyazhelova, Tatiana V., Vasina, Daria V.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6374638/
https://www.ncbi.nlm.nih.gov/pubmed/30792703
http://dx.doi.org/10.3389/fmicb.2019.00152
_version_ 1783395202622291968
author Savinova, Olga S.
Moiseenko, Konstantin V.
Vavilova, Ekaterina A.
Chulkin, Andrey M.
Fedorova, Tatiana V.
Tyazhelova, Tatiana V.
Vasina, Daria V.
author_facet Savinova, Olga S.
Moiseenko, Konstantin V.
Vavilova, Ekaterina A.
Chulkin, Andrey M.
Fedorova, Tatiana V.
Tyazhelova, Tatiana V.
Vasina, Daria V.
author_sort Savinova, Olga S.
collection PubMed
description Laccase is one of the oldest known and intensively studied fungal enzymes capable of oxidizing recalcitrant lignin-resembling phenolic compounds. It is currently well established that fungal genomes almost always contain several non-allelic copies of laccase genes (laccase multigene families); nevertheless, many aspects of laccase multigenicity, for example, their precise biological functions or evolutionary relationships, are mostly unknown. Here, we present a detailed evolutionary analysis of the sensu stricto laccase genes (CAZy – AA1_1) from fungi of the Polyporales order. The conducted analysis provides a better understanding of the Polyporales laccase multigenicity and allows for the systemization of the individual features of different laccase isozymes. In addition, we provide a comparison of the biochemical and catalytic properties of the four laccase isozymes from Trametes hirsuta and suggest their functional diversification within the multigene family.
format Online
Article
Text
id pubmed-6374638
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Frontiers Media S.A.
record_format MEDLINE/PubMed
spelling pubmed-63746382019-02-21 Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta Savinova, Olga S. Moiseenko, Konstantin V. Vavilova, Ekaterina A. Chulkin, Andrey M. Fedorova, Tatiana V. Tyazhelova, Tatiana V. Vasina, Daria V. Front Microbiol Microbiology Laccase is one of the oldest known and intensively studied fungal enzymes capable of oxidizing recalcitrant lignin-resembling phenolic compounds. It is currently well established that fungal genomes almost always contain several non-allelic copies of laccase genes (laccase multigene families); nevertheless, many aspects of laccase multigenicity, for example, their precise biological functions or evolutionary relationships, are mostly unknown. Here, we present a detailed evolutionary analysis of the sensu stricto laccase genes (CAZy – AA1_1) from fungi of the Polyporales order. The conducted analysis provides a better understanding of the Polyporales laccase multigenicity and allows for the systemization of the individual features of different laccase isozymes. In addition, we provide a comparison of the biochemical and catalytic properties of the four laccase isozymes from Trametes hirsuta and suggest their functional diversification within the multigene family. Frontiers Media S.A. 2019-02-06 /pmc/articles/PMC6374638/ /pubmed/30792703 http://dx.doi.org/10.3389/fmicb.2019.00152 Text en Copyright © 2019 Savinova, Moiseenko, Vavilova, Chulkin, Fedorova, Tyazhelova and Vasina. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Microbiology
Savinova, Olga S.
Moiseenko, Konstantin V.
Vavilova, Ekaterina A.
Chulkin, Andrey M.
Fedorova, Tatiana V.
Tyazhelova, Tatiana V.
Vasina, Daria V.
Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta
title Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta
title_full Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta
title_fullStr Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta
title_full_unstemmed Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta
title_short Evolutionary Relationships Between the Laccase Genes of Polyporales: Orthology-Based Classification of Laccase Isozymes and Functional Insight From Trametes hirsuta
title_sort evolutionary relationships between the laccase genes of polyporales: orthology-based classification of laccase isozymes and functional insight from trametes hirsuta
topic Microbiology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6374638/
https://www.ncbi.nlm.nih.gov/pubmed/30792703
http://dx.doi.org/10.3389/fmicb.2019.00152
work_keys_str_mv AT savinovaolgas evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta
AT moiseenkokonstantinv evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta
AT vavilovaekaterinaa evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta
AT chulkinandreym evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta
AT fedorovatatianav evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta
AT tyazhelovatatianav evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta
AT vasinadariav evolutionaryrelationshipsbetweenthelaccasegenesofpolyporalesorthologybasedclassificationoflaccaseisozymesandfunctionalinsightfromtrameteshirsuta