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Widespread RNA editing dysregulation in brains from autistic individuals

Transcriptomic analyses of postmortem brains have begun to elucidate the molecular abnormalities in autism spectrum disorder (ASD). However, a crucial pathway involved in synaptic development, RNA editing, has not yet been studied on a genome-wide scale. Here, we profiled global patterns of adenosin...

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Autores principales: Tran, Stephen S., Jun, Hyun-Ik, Bahn, Jae Hoon, Azghadi, Adel, Ramaswami, Gokul, Van Nostrand, Eric L., Nguyen, Thai B., Hsiao, Yun-Hua E., Lee, Changhoon, Pratt, Gabriel A., Martínez-Cerdeño, Verónica, Hagerman, Randi J., Yeo, Gene W., Geschwind, Daniel H., Xiao, Xinshu
Formato: Online Artículo Texto
Lenguaje:English
Publicado: 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6375307/
https://www.ncbi.nlm.nih.gov/pubmed/30559470
http://dx.doi.org/10.1038/s41593-018-0287-x
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author Tran, Stephen S.
Jun, Hyun-Ik
Bahn, Jae Hoon
Azghadi, Adel
Ramaswami, Gokul
Van Nostrand, Eric L.
Nguyen, Thai B.
Hsiao, Yun-Hua E.
Lee, Changhoon
Pratt, Gabriel A.
Martínez-Cerdeño, Verónica
Hagerman, Randi J.
Yeo, Gene W.
Geschwind, Daniel H.
Xiao, Xinshu
author_facet Tran, Stephen S.
Jun, Hyun-Ik
Bahn, Jae Hoon
Azghadi, Adel
Ramaswami, Gokul
Van Nostrand, Eric L.
Nguyen, Thai B.
Hsiao, Yun-Hua E.
Lee, Changhoon
Pratt, Gabriel A.
Martínez-Cerdeño, Verónica
Hagerman, Randi J.
Yeo, Gene W.
Geschwind, Daniel H.
Xiao, Xinshu
author_sort Tran, Stephen S.
collection PubMed
description Transcriptomic analyses of postmortem brains have begun to elucidate the molecular abnormalities in autism spectrum disorder (ASD). However, a crucial pathway involved in synaptic development, RNA editing, has not yet been studied on a genome-wide scale. Here, we profiled global patterns of adenosine-to-inosine (A-to-I) editing in a large cohort of post-mortem ASD brains. We observed a global bias for hypoediting in ASD brains, which was shared across brain regions and involved many synaptic genes. We show that the Fragile X proteins, FMRP and FXR1P, interact with ADAR proteins and modulate A-to-I editing. Furthermore, we observed convergent patterns of RNA editing alterations in ASD and Fragile X syndrome, establishing this as a molecular link between these related diseases. Our findings, which are corroborated across multiple datasets, including dup15q cases associated with intellectual disability, highlight RNA editing dysregulation in ASD and reveal novel mechanisms underlying this disorder.
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spelling pubmed-63753072019-06-17 Widespread RNA editing dysregulation in brains from autistic individuals Tran, Stephen S. Jun, Hyun-Ik Bahn, Jae Hoon Azghadi, Adel Ramaswami, Gokul Van Nostrand, Eric L. Nguyen, Thai B. Hsiao, Yun-Hua E. Lee, Changhoon Pratt, Gabriel A. Martínez-Cerdeño, Verónica Hagerman, Randi J. Yeo, Gene W. Geschwind, Daniel H. Xiao, Xinshu Nat Neurosci Article Transcriptomic analyses of postmortem brains have begun to elucidate the molecular abnormalities in autism spectrum disorder (ASD). However, a crucial pathway involved in synaptic development, RNA editing, has not yet been studied on a genome-wide scale. Here, we profiled global patterns of adenosine-to-inosine (A-to-I) editing in a large cohort of post-mortem ASD brains. We observed a global bias for hypoediting in ASD brains, which was shared across brain regions and involved many synaptic genes. We show that the Fragile X proteins, FMRP and FXR1P, interact with ADAR proteins and modulate A-to-I editing. Furthermore, we observed convergent patterns of RNA editing alterations in ASD and Fragile X syndrome, establishing this as a molecular link between these related diseases. Our findings, which are corroborated across multiple datasets, including dup15q cases associated with intellectual disability, highlight RNA editing dysregulation in ASD and reveal novel mechanisms underlying this disorder. 2018-12-17 2019-01 /pmc/articles/PMC6375307/ /pubmed/30559470 http://dx.doi.org/10.1038/s41593-018-0287-x Text en Users may view, print, copy, and download text and data-mine the content in such documents, for the purposes of academic research, subject always to the full Conditions of use:http://www.nature.com/authors/editorial_policies/license.html#terms
spellingShingle Article
Tran, Stephen S.
Jun, Hyun-Ik
Bahn, Jae Hoon
Azghadi, Adel
Ramaswami, Gokul
Van Nostrand, Eric L.
Nguyen, Thai B.
Hsiao, Yun-Hua E.
Lee, Changhoon
Pratt, Gabriel A.
Martínez-Cerdeño, Verónica
Hagerman, Randi J.
Yeo, Gene W.
Geschwind, Daniel H.
Xiao, Xinshu
Widespread RNA editing dysregulation in brains from autistic individuals
title Widespread RNA editing dysregulation in brains from autistic individuals
title_full Widespread RNA editing dysregulation in brains from autistic individuals
title_fullStr Widespread RNA editing dysregulation in brains from autistic individuals
title_full_unstemmed Widespread RNA editing dysregulation in brains from autistic individuals
title_short Widespread RNA editing dysregulation in brains from autistic individuals
title_sort widespread rna editing dysregulation in brains from autistic individuals
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6375307/
https://www.ncbi.nlm.nih.gov/pubmed/30559470
http://dx.doi.org/10.1038/s41593-018-0287-x
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