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BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease

Alzheimer's disease (AD) is a devastating neurodegenerative disorder affecting millions of people worldwide. Progressive and relentless efforts are being made for therapeutic development by way of advancing understanding of non-invasive imaging modalities for the causal molecular process of AD....

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Autores principales: Sharma, Ankita, Shukla, Deepika, Goel, Tripti, Mandal, Pravat Kumar
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6375828/
https://www.ncbi.nlm.nih.gov/pubmed/30800093
http://dx.doi.org/10.3389/fneur.2019.00009
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author Sharma, Ankita
Shukla, Deepika
Goel, Tripti
Mandal, Pravat Kumar
author_facet Sharma, Ankita
Shukla, Deepika
Goel, Tripti
Mandal, Pravat Kumar
author_sort Sharma, Ankita
collection PubMed
description Alzheimer's disease (AD) is a devastating neurodegenerative disorder affecting millions of people worldwide. Progressive and relentless efforts are being made for therapeutic development by way of advancing understanding of non-invasive imaging modalities for the causal molecular process of AD. We present a Hadoop-based big data framework integrating non-invasive magnetic resonance imaging (MRI), MR spectroscopy (MRS) as well as neuropsychological test outcomes to identify early diagnostic biomarkers of AD. This big data framework for AD incorporates the three “V”s (volume, variety, velocity) with advanced data mining, machine learning, and statistical modeling algorithms. A large volume of longitudinal information from non-invasive imaging modalities with colligated parametric variety and speed for both data acquisition and processing as velocity complete the fundamental requirements of this big data framework for early AD diagnosis. Brain structural, neurochemical, and behavioral features are extracted from MRI, MRS, and neuropsychological scores, respectively. Subsequently, feature selection and ensemble-based classification are proposed and their outputs are fused based on the combination rule for final accurate classification and validation from clinicians. A multi-modality-based decision framework (BHARAT) for classification of early AD will be immensely helpful.
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spelling pubmed-63758282019-02-22 BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease Sharma, Ankita Shukla, Deepika Goel, Tripti Mandal, Pravat Kumar Front Neurol Neurology Alzheimer's disease (AD) is a devastating neurodegenerative disorder affecting millions of people worldwide. Progressive and relentless efforts are being made for therapeutic development by way of advancing understanding of non-invasive imaging modalities for the causal molecular process of AD. We present a Hadoop-based big data framework integrating non-invasive magnetic resonance imaging (MRI), MR spectroscopy (MRS) as well as neuropsychological test outcomes to identify early diagnostic biomarkers of AD. This big data framework for AD incorporates the three “V”s (volume, variety, velocity) with advanced data mining, machine learning, and statistical modeling algorithms. A large volume of longitudinal information from non-invasive imaging modalities with colligated parametric variety and speed for both data acquisition and processing as velocity complete the fundamental requirements of this big data framework for early AD diagnosis. Brain structural, neurochemical, and behavioral features are extracted from MRI, MRS, and neuropsychological scores, respectively. Subsequently, feature selection and ensemble-based classification are proposed and their outputs are fused based on the combination rule for final accurate classification and validation from clinicians. A multi-modality-based decision framework (BHARAT) for classification of early AD will be immensely helpful. Frontiers Media S.A. 2019-02-08 /pmc/articles/PMC6375828/ /pubmed/30800093 http://dx.doi.org/10.3389/fneur.2019.00009 Text en Copyright © 2019 Sharma, Shukla, Goel and Mandal. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Neurology
Sharma, Ankita
Shukla, Deepika
Goel, Tripti
Mandal, Pravat Kumar
BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease
title BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease
title_full BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease
title_fullStr BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease
title_full_unstemmed BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease
title_short BHARAT: An Integrated Big Data Analytic Model for Early Diagnostic Biomarker of Alzheimer's Disease
title_sort bharat: an integrated big data analytic model for early diagnostic biomarker of alzheimer's disease
topic Neurology
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6375828/
https://www.ncbi.nlm.nih.gov/pubmed/30800093
http://dx.doi.org/10.3389/fneur.2019.00009
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