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Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data
BACKGROUND: In some clinical situations, patients experience repeated events of the same type. Among these, cancer recurrences can result in terminal events such as death. Therefore, here we dynamically predicted the risks of repeated and terminal events given longitudinal histories observed before...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6376774/ https://www.ncbi.nlm.nih.gov/pubmed/30764772 http://dx.doi.org/10.1186/s12874-019-0677-0 |
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author | Yokota, Isao Matsuyama, Yutaka |
author_facet | Yokota, Isao Matsuyama, Yutaka |
author_sort | Yokota, Isao |
collection | PubMed |
description | BACKGROUND: In some clinical situations, patients experience repeated events of the same type. Among these, cancer recurrences can result in terminal events such as death. Therefore, here we dynamically predicted the risks of repeated and terminal events given longitudinal histories observed before prediction time using dynamic pseudo-observations (DPOs) in a landmarking model. METHODS: The proposed DPOs were calculated using Aalen–Johansen estimator for the event processes described in the multi-state model. Furthermore, in the absence of a terminal event, a more convenient approach without matrix operation was described using the ordering of repeated events. Finally, generalized estimating equations were used to calculate probabilities of repeated and terminal events, which were treated as multinomial outcomes. RESULTS: Simulation studies were conducted to assess bias and investigate the efficiency of the proposed DPOs in a finite sample. Little bias was detected in DPOs even under relatively heavy censoring, and the method was applied to data from patients with colorectal liver metastases. CONCLUSIONS: The proposed method enabled intuitive interpretations of terminal event settings. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12874-019-0677-0) contains supplementary material, which is available to authorized users. |
format | Online Article Text |
id | pubmed-6376774 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-63767742019-02-27 Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data Yokota, Isao Matsuyama, Yutaka BMC Med Res Methodol Research Article BACKGROUND: In some clinical situations, patients experience repeated events of the same type. Among these, cancer recurrences can result in terminal events such as death. Therefore, here we dynamically predicted the risks of repeated and terminal events given longitudinal histories observed before prediction time using dynamic pseudo-observations (DPOs) in a landmarking model. METHODS: The proposed DPOs were calculated using Aalen–Johansen estimator for the event processes described in the multi-state model. Furthermore, in the absence of a terminal event, a more convenient approach without matrix operation was described using the ordering of repeated events. Finally, generalized estimating equations were used to calculate probabilities of repeated and terminal events, which were treated as multinomial outcomes. RESULTS: Simulation studies were conducted to assess bias and investigate the efficiency of the proposed DPOs in a finite sample. Little bias was detected in DPOs even under relatively heavy censoring, and the method was applied to data from patients with colorectal liver metastases. CONCLUSIONS: The proposed method enabled intuitive interpretations of terminal event settings. ELECTRONIC SUPPLEMENTARY MATERIAL: The online version of this article (10.1186/s12874-019-0677-0) contains supplementary material, which is available to authorized users. BioMed Central 2019-02-14 /pmc/articles/PMC6376774/ /pubmed/30764772 http://dx.doi.org/10.1186/s12874-019-0677-0 Text en © The Author(s). 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Article Yokota, Isao Matsuyama, Yutaka Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
title | Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
title_full | Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
title_fullStr | Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
title_full_unstemmed | Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
title_short | Dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
title_sort | dynamic prediction of repeated events data based on landmarking model: application to colorectal liver metastases data |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6376774/ https://www.ncbi.nlm.nih.gov/pubmed/30764772 http://dx.doi.org/10.1186/s12874-019-0677-0 |
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