Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina
Impatiens balsamina is both an ornamental and pharmacologically important plant widely distributed in many Asian countries. The leaf of the plant contains many secondary metabolites possessing anti-microbial, anti-tumour and anti-cancer properties. Though there are many phytochemical studies done on...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Elsevier
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6378892/ https://www.ncbi.nlm.nih.gov/pubmed/30815523 http://dx.doi.org/10.1016/j.dib.2018.12.042 |
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author | Foong, Lian Chee Ho, Anthony Siong Hock Yeo, Brandon Pei Hui Lim, Yang Mooi Tam, Sheh May |
author_facet | Foong, Lian Chee Ho, Anthony Siong Hock Yeo, Brandon Pei Hui Lim, Yang Mooi Tam, Sheh May |
author_sort | Foong, Lian Chee |
collection | PubMed |
description | Impatiens balsamina is both an ornamental and pharmacologically important plant widely distributed in many Asian countries. The leaf of the plant contains many secondary metabolites possessing anti-microbial, anti-tumour and anti-cancer properties. Though there are many phytochemical studies done on the different natural extracts for this plant, not much of genetic information is currently available. This is the first transcriptome of I. balsamina leaf using paired-end Illumina HiSeq sequencing which generated 10.79 GB of raw data. Information of pre-processing (reads filtering), de novo assembly and functional annotation are presented. This data is accessible via NCBI BioProject (PRJNA505711). |
format | Online Article Text |
id | pubmed-6378892 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Elsevier |
record_format | MEDLINE/PubMed |
spelling | pubmed-63788922019-02-27 Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina Foong, Lian Chee Ho, Anthony Siong Hock Yeo, Brandon Pei Hui Lim, Yang Mooi Tam, Sheh May Data Brief Genetics, Genomics and Molecular Biology Impatiens balsamina is both an ornamental and pharmacologically important plant widely distributed in many Asian countries. The leaf of the plant contains many secondary metabolites possessing anti-microbial, anti-tumour and anti-cancer properties. Though there are many phytochemical studies done on the different natural extracts for this plant, not much of genetic information is currently available. This is the first transcriptome of I. balsamina leaf using paired-end Illumina HiSeq sequencing which generated 10.79 GB of raw data. Information of pre-processing (reads filtering), de novo assembly and functional annotation are presented. This data is accessible via NCBI BioProject (PRJNA505711). Elsevier 2018-12-16 /pmc/articles/PMC6378892/ /pubmed/30815523 http://dx.doi.org/10.1016/j.dib.2018.12.042 Text en © 2019 The Authors http://creativecommons.org/licenses/by/4.0/ This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Genetics, Genomics and Molecular Biology Foong, Lian Chee Ho, Anthony Siong Hock Yeo, Brandon Pei Hui Lim, Yang Mooi Tam, Sheh May Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina |
title | Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina |
title_full | Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina |
title_fullStr | Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina |
title_full_unstemmed | Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina |
title_short | Data of de novo assembly and functional annotation of the leaf transcriptome of Impatiens balsamina |
title_sort | data of de novo assembly and functional annotation of the leaf transcriptome of impatiens balsamina |
topic | Genetics, Genomics and Molecular Biology |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6378892/ https://www.ncbi.nlm.nih.gov/pubmed/30815523 http://dx.doi.org/10.1016/j.dib.2018.12.042 |
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