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Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system
BACKGROUND: Aboveground biomass (AGB) is a widely used agronomic parameter for characterizing crop growth status and predicting grain yield. The rapid and accurate estimation of AGB in a non-destructive way is useful for making informed decisions on precision crop management. Previous studies have i...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
BioMed Central
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6381699/ https://www.ncbi.nlm.nih.gov/pubmed/30828356 http://dx.doi.org/10.1186/s13007-019-0402-3 |
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author | Lu, Ning Zhou, Jie Han, Zixu Li, Dong Cao, Qiang Yao, Xia Tian, Yongchao Zhu, Yan Cao, Weixing Cheng, Tao |
author_facet | Lu, Ning Zhou, Jie Han, Zixu Li, Dong Cao, Qiang Yao, Xia Tian, Yongchao Zhu, Yan Cao, Weixing Cheng, Tao |
author_sort | Lu, Ning |
collection | PubMed |
description | BACKGROUND: Aboveground biomass (AGB) is a widely used agronomic parameter for characterizing crop growth status and predicting grain yield. The rapid and accurate estimation of AGB in a non-destructive way is useful for making informed decisions on precision crop management. Previous studies have investigated vegetation indices (VIs) and canopy height metrics derived from Unmanned Aerial Vehicle (UAV) data to estimate the AGB of various crops. However, the input variables were derived either from one type of data or from different sensors on board UAVs. Whether the combination of VIs and canopy height metrics derived from a single low-cost UAV system can improve the AGB estimation accuracy remains unclear. This study used a low-cost UAV system to acquire imagery at 30 m flight altitude at critical growth stages of wheat in Rugao of eastern China. The experiments were conducted in 2016 and 2017 and involved 36 field plots representing variations in cultivar, nitrogen fertilization level and sowing density. We evaluated the performance of VIs, canopy height metrics and their combination for AGB estimation in wheat with the stepwise multiple linear regression (SMLR) and three types of machine learning algorithms (support vector regression, SVR; extreme learning machine, ELM; random forest, RF). RESULTS: Our results demonstrated that the combination of VIs and canopy height metrics improved the estimation accuracy for AGB of wheat over the use of VIs or canopy height metrics alone. Specifically, RF performed the best among the SMLR and three machine learning algorithms regardless of using all the original variables or selected variables by the SMLR. The best accuracy (R(2) = 0.78, RMSE = 1.34 t/ha, rRMSE = 28.98%) was obtained when applying RF to the combination of VIs and canopy height metrics. CONCLUSIONS: Our findings implied that an inexpensive approach consisting of the RF algorithm and the combination of RGB imagery and point cloud data derived from a low-cost UAV system at the consumer-grade level can be used to improve the accuracy of AGB estimation and have potential in the practical applications in the rapid estimation of other growth parameters. |
format | Online Article Text |
id | pubmed-6381699 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | BioMed Central |
record_format | MEDLINE/PubMed |
spelling | pubmed-63816992019-03-01 Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system Lu, Ning Zhou, Jie Han, Zixu Li, Dong Cao, Qiang Yao, Xia Tian, Yongchao Zhu, Yan Cao, Weixing Cheng, Tao Plant Methods Research BACKGROUND: Aboveground biomass (AGB) is a widely used agronomic parameter for characterizing crop growth status and predicting grain yield. The rapid and accurate estimation of AGB in a non-destructive way is useful for making informed decisions on precision crop management. Previous studies have investigated vegetation indices (VIs) and canopy height metrics derived from Unmanned Aerial Vehicle (UAV) data to estimate the AGB of various crops. However, the input variables were derived either from one type of data or from different sensors on board UAVs. Whether the combination of VIs and canopy height metrics derived from a single low-cost UAV system can improve the AGB estimation accuracy remains unclear. This study used a low-cost UAV system to acquire imagery at 30 m flight altitude at critical growth stages of wheat in Rugao of eastern China. The experiments were conducted in 2016 and 2017 and involved 36 field plots representing variations in cultivar, nitrogen fertilization level and sowing density. We evaluated the performance of VIs, canopy height metrics and their combination for AGB estimation in wheat with the stepwise multiple linear regression (SMLR) and three types of machine learning algorithms (support vector regression, SVR; extreme learning machine, ELM; random forest, RF). RESULTS: Our results demonstrated that the combination of VIs and canopy height metrics improved the estimation accuracy for AGB of wheat over the use of VIs or canopy height metrics alone. Specifically, RF performed the best among the SMLR and three machine learning algorithms regardless of using all the original variables or selected variables by the SMLR. The best accuracy (R(2) = 0.78, RMSE = 1.34 t/ha, rRMSE = 28.98%) was obtained when applying RF to the combination of VIs and canopy height metrics. CONCLUSIONS: Our findings implied that an inexpensive approach consisting of the RF algorithm and the combination of RGB imagery and point cloud data derived from a low-cost UAV system at the consumer-grade level can be used to improve the accuracy of AGB estimation and have potential in the practical applications in the rapid estimation of other growth parameters. BioMed Central 2019-02-20 /pmc/articles/PMC6381699/ /pubmed/30828356 http://dx.doi.org/10.1186/s13007-019-0402-3 Text en © The Author(s) 2019 Open AccessThis article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The Creative Commons Public Domain Dedication waiver (http://creativecommons.org/publicdomain/zero/1.0/) applies to the data made available in this article, unless otherwise stated. |
spellingShingle | Research Lu, Ning Zhou, Jie Han, Zixu Li, Dong Cao, Qiang Yao, Xia Tian, Yongchao Zhu, Yan Cao, Weixing Cheng, Tao Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
title | Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
title_full | Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
title_fullStr | Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
title_full_unstemmed | Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
title_short | Improved estimation of aboveground biomass in wheat from RGB imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
title_sort | improved estimation of aboveground biomass in wheat from rgb imagery and point cloud data acquired with a low-cost unmanned aerial vehicle system |
topic | Research |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6381699/ https://www.ncbi.nlm.nih.gov/pubmed/30828356 http://dx.doi.org/10.1186/s13007-019-0402-3 |
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