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Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR

BACKGROUND: Acinetobacter baumannii is one of the most important agents of hospital infections. Rapid and accurate identification and genotyping of A. baumannii is very important, especially in burn hospitals in order to prevent the spread of related nosocomial infections and to further epidemiologi...

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Autores principales: Falah, Faezeh, Shokoohizadeh, Leili, Adabi, Maryam
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6383092/
https://www.ncbi.nlm.nih.gov/pubmed/30815282
http://dx.doi.org/10.1177/2059513119831369
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author Falah, Faezeh
Shokoohizadeh, Leili
Adabi, Maryam
author_facet Falah, Faezeh
Shokoohizadeh, Leili
Adabi, Maryam
author_sort Falah, Faezeh
collection PubMed
description BACKGROUND: Acinetobacter baumannii is one of the most important agents of hospital infections. Rapid and accurate identification and genotyping of A. baumannii is very important, especially in burn hospitals in order to prevent the spread of related nosocomial infections and to further epidemiological studies. MATERIAL AND METHODS: For two months, 82 A. baumannii isolates were collected from burn wound swabs of patients in a major burn hospital in Tehran. A. baumannii isolates were identified by conventional microbiological test and polymerase chain reaction (PCR) using the primers of blaOXA-51 gene, while the genetic linkage of A. baumannii isolates was investigated by enterobacterial repetitive intragenic consensus (ERIC)-PCR technique. Similarity, a cut-off of ⩾ 95% was considered for classifying the genotypes. RESULTS: The molecular test (PCR) confirmed 97.56% of phenotypic results for the detection of A. baumannii isolates. ERIC-PCR results revealed 14 different ERIC patterns (ERIC-types) including 11 common types and three unique types. CONCLUSION: Our findings show that we can simply and quickly detect A. baumannii isolates by PCR using blaOXA genes and genetic diversity by ERIC-PCR, respectively. These rapid and simple techniques for the routine screening and identification of clinical A. baumannii isolates could be useful with epidemic potential.
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spelling pubmed-63830922019-02-27 Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR Falah, Faezeh Shokoohizadeh, Leili Adabi, Maryam Scars Burn Heal Original Article BACKGROUND: Acinetobacter baumannii is one of the most important agents of hospital infections. Rapid and accurate identification and genotyping of A. baumannii is very important, especially in burn hospitals in order to prevent the spread of related nosocomial infections and to further epidemiological studies. MATERIAL AND METHODS: For two months, 82 A. baumannii isolates were collected from burn wound swabs of patients in a major burn hospital in Tehran. A. baumannii isolates were identified by conventional microbiological test and polymerase chain reaction (PCR) using the primers of blaOXA-51 gene, while the genetic linkage of A. baumannii isolates was investigated by enterobacterial repetitive intragenic consensus (ERIC)-PCR technique. Similarity, a cut-off of ⩾ 95% was considered for classifying the genotypes. RESULTS: The molecular test (PCR) confirmed 97.56% of phenotypic results for the detection of A. baumannii isolates. ERIC-PCR results revealed 14 different ERIC patterns (ERIC-types) including 11 common types and three unique types. CONCLUSION: Our findings show that we can simply and quickly detect A. baumannii isolates by PCR using blaOXA genes and genetic diversity by ERIC-PCR, respectively. These rapid and simple techniques for the routine screening and identification of clinical A. baumannii isolates could be useful with epidemic potential. SAGE Publications 2019-02-19 /pmc/articles/PMC6383092/ /pubmed/30815282 http://dx.doi.org/10.1177/2059513119831369 Text en © The Author(s) 2019 http://www.creativecommons.org/licenses/by-nc/4.0/ This article is distributed under the terms of the Creative Commons Attribution-NonCommercial 4.0 License (http://www.creativecommons.org/licenses/by-nc/4.0/) which permits non-commercial use, reproduction and distribution of the work without further permission provided the original work is attributed as specified on the SAGE and Open Access pages (https://us.sagepub.com/en-us/nam/open-access-at-sage).
spellingShingle Original Article
Falah, Faezeh
Shokoohizadeh, Leili
Adabi, Maryam
Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR
title Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR
title_full Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR
title_fullStr Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR
title_full_unstemmed Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR
title_short Molecular identification and genotyping of Acinetobacter baumannii isolated from burn patients by PCR and ERIC-PCR
title_sort molecular identification and genotyping of acinetobacter baumannii isolated from burn patients by pcr and eric-pcr
topic Original Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6383092/
https://www.ncbi.nlm.nih.gov/pubmed/30815282
http://dx.doi.org/10.1177/2059513119831369
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