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Copy number variation of LINGO1 in familial dystonic tremor

OBJECTIVE: To elucidate the genetic cause of a large 5 generation South Indian family with multiple individuals with predominantly an upper limb postural tremor and posturing in keeping with another form of tremor, namely, dystonic tremor. METHODS: Whole-genome single nucleotide polymorphism (SNP) m...

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Autores principales: Alakbarzade, Vafa, Iype, Thomas, Chioza, Barry A., Singh, Royana, Harlalka, Gaurav V., Hardy, Holly, Sreekantan-Nair, Ajith, Proukakis, Christos, Peall, Kathryn, Clark, Lorraine N., Caswell, Richard, Lango Allen, Hana, Wakeling, Matthew, Chilton, John K., Baple, Emma L., Louis, Elan D., Warner, Thomas T., Crosby, Andrew H.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Wolters Kluwer 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6384021/
https://www.ncbi.nlm.nih.gov/pubmed/30842974
http://dx.doi.org/10.1212/NXG.0000000000000307
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author Alakbarzade, Vafa
Iype, Thomas
Chioza, Barry A.
Singh, Royana
Harlalka, Gaurav V.
Hardy, Holly
Sreekantan-Nair, Ajith
Proukakis, Christos
Peall, Kathryn
Clark, Lorraine N.
Caswell, Richard
Lango Allen, Hana
Wakeling, Matthew
Chilton, John K.
Baple, Emma L.
Louis, Elan D.
Warner, Thomas T.
Crosby, Andrew H.
author_facet Alakbarzade, Vafa
Iype, Thomas
Chioza, Barry A.
Singh, Royana
Harlalka, Gaurav V.
Hardy, Holly
Sreekantan-Nair, Ajith
Proukakis, Christos
Peall, Kathryn
Clark, Lorraine N.
Caswell, Richard
Lango Allen, Hana
Wakeling, Matthew
Chilton, John K.
Baple, Emma L.
Louis, Elan D.
Warner, Thomas T.
Crosby, Andrew H.
author_sort Alakbarzade, Vafa
collection PubMed
description OBJECTIVE: To elucidate the genetic cause of a large 5 generation South Indian family with multiple individuals with predominantly an upper limb postural tremor and posturing in keeping with another form of tremor, namely, dystonic tremor. METHODS: Whole-genome single nucleotide polymorphism (SNP) microarray analysis was undertaken to look for copy number variants in the affected individuals. RESULTS: Whole-genome SNP microarray studies identified a tandem duplicated genomic segment of chromosome 15q24 present in all affected family members. Whole-genome sequencing demonstrated that it comprised a ∼550-kb tandem duplication encompassing the entire LINGO1 gene. CONCLUSIONS: The identification of a genomic duplication as the likely molecular cause of this condition, resulting in an additional LINGO1 gene copy in affected cases, adds further support for a causal role of this gene in tremor disorders and implicates increased expression levels of LINGO1 as a potential pathogenic mechanism.
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spelling pubmed-63840212019-03-06 Copy number variation of LINGO1 in familial dystonic tremor Alakbarzade, Vafa Iype, Thomas Chioza, Barry A. Singh, Royana Harlalka, Gaurav V. Hardy, Holly Sreekantan-Nair, Ajith Proukakis, Christos Peall, Kathryn Clark, Lorraine N. Caswell, Richard Lango Allen, Hana Wakeling, Matthew Chilton, John K. Baple, Emma L. Louis, Elan D. Warner, Thomas T. Crosby, Andrew H. Neurol Genet Article OBJECTIVE: To elucidate the genetic cause of a large 5 generation South Indian family with multiple individuals with predominantly an upper limb postural tremor and posturing in keeping with another form of tremor, namely, dystonic tremor. METHODS: Whole-genome single nucleotide polymorphism (SNP) microarray analysis was undertaken to look for copy number variants in the affected individuals. RESULTS: Whole-genome SNP microarray studies identified a tandem duplicated genomic segment of chromosome 15q24 present in all affected family members. Whole-genome sequencing demonstrated that it comprised a ∼550-kb tandem duplication encompassing the entire LINGO1 gene. CONCLUSIONS: The identification of a genomic duplication as the likely molecular cause of this condition, resulting in an additional LINGO1 gene copy in affected cases, adds further support for a causal role of this gene in tremor disorders and implicates increased expression levels of LINGO1 as a potential pathogenic mechanism. Wolters Kluwer 2019-02-04 /pmc/articles/PMC6384021/ /pubmed/30842974 http://dx.doi.org/10.1212/NXG.0000000000000307 Text en Copyright © 2019 The Author(s). Published by Wolters Kluwer Health, Inc. on behalf of the American Academy of Neurology. This is an open access article distributed under the terms of the Creative Commons Attribution License 4.0 (CC BY) (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Article
Alakbarzade, Vafa
Iype, Thomas
Chioza, Barry A.
Singh, Royana
Harlalka, Gaurav V.
Hardy, Holly
Sreekantan-Nair, Ajith
Proukakis, Christos
Peall, Kathryn
Clark, Lorraine N.
Caswell, Richard
Lango Allen, Hana
Wakeling, Matthew
Chilton, John K.
Baple, Emma L.
Louis, Elan D.
Warner, Thomas T.
Crosby, Andrew H.
Copy number variation of LINGO1 in familial dystonic tremor
title Copy number variation of LINGO1 in familial dystonic tremor
title_full Copy number variation of LINGO1 in familial dystonic tremor
title_fullStr Copy number variation of LINGO1 in familial dystonic tremor
title_full_unstemmed Copy number variation of LINGO1 in familial dystonic tremor
title_short Copy number variation of LINGO1 in familial dystonic tremor
title_sort copy number variation of lingo1 in familial dystonic tremor
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6384021/
https://www.ncbi.nlm.nih.gov/pubmed/30842974
http://dx.doi.org/10.1212/NXG.0000000000000307
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