Cargando…

Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers

Post-traumatic stress disorder is a concerning psychobehavioral disorder thought to emerge from the complex interaction between genetic and environmental factors. For soldiers exposed to combat, the risk of developing this disorder is twofold and diagnosis is often late, when much sequela has set in...

Descripción completa

Detalles Bibliográficos
Autores principales: Boscarino, Cathy, Nalpathamkalam, Thomas, Pellecchia, Giovanna, Li, Weili, Thiruvahindrapuram, Bhooma, Merico, Daniele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Genetics Society of America 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6385974/
https://www.ncbi.nlm.nih.gov/pubmed/30622122
http://dx.doi.org/10.1534/g3.118.200516
_version_ 1783397294829207552
author Boscarino, Cathy
Nalpathamkalam, Thomas
Pellecchia, Giovanna
Li, Weili
Thiruvahindrapuram, Bhooma
Merico, Daniele
author_facet Boscarino, Cathy
Nalpathamkalam, Thomas
Pellecchia, Giovanna
Li, Weili
Thiruvahindrapuram, Bhooma
Merico, Daniele
author_sort Boscarino, Cathy
collection PubMed
description Post-traumatic stress disorder is a concerning psychobehavioral disorder thought to emerge from the complex interaction between genetic and environmental factors. For soldiers exposed to combat, the risk of developing this disorder is twofold and diagnosis is often late, when much sequela has set in. To be able to identify and diagnose in advance those at “risk” of developing post-traumatic stress disorder, would greatly taper the gap between late sequelae and treatment. Therefore, this study sought to determine whether the transcriptome can be used to track the development of post-traumatic stress disorder in this unique and susceptible cohort of individuals. Gene expression levels in peripheral blood samples from 85 Canadian infantry soldiers (n = 58 participants negative for symptoms of post-traumatic stress disorder and n = 27 participants with symptoms of post-traumatic stress disorder) following return from deployment to Afghanistan were determined using RNA sequencing technology. Count-based gene expression quantification, normalization and differential analysis (with thorough correction for confounders) revealed genes associated to PTSD; LRP8 and GOLM1. These preliminary results provide a proof-of-principle for the diagnostic utility of blood-based gene expression profiles for tracking symptoms of post-traumatic stress disorder in soldiers returning from tour. It is also the first to report transcriptome-wide expression profiles alongside a post-traumatic symptom checklist.
format Online
Article
Text
id pubmed-6385974
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher Genetics Society of America
record_format MEDLINE/PubMed
spelling pubmed-63859742019-02-26 Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers Boscarino, Cathy Nalpathamkalam, Thomas Pellecchia, Giovanna Li, Weili Thiruvahindrapuram, Bhooma Merico, Daniele G3 (Bethesda) Investigations Post-traumatic stress disorder is a concerning psychobehavioral disorder thought to emerge from the complex interaction between genetic and environmental factors. For soldiers exposed to combat, the risk of developing this disorder is twofold and diagnosis is often late, when much sequela has set in. To be able to identify and diagnose in advance those at “risk” of developing post-traumatic stress disorder, would greatly taper the gap between late sequelae and treatment. Therefore, this study sought to determine whether the transcriptome can be used to track the development of post-traumatic stress disorder in this unique and susceptible cohort of individuals. Gene expression levels in peripheral blood samples from 85 Canadian infantry soldiers (n = 58 participants negative for symptoms of post-traumatic stress disorder and n = 27 participants with symptoms of post-traumatic stress disorder) following return from deployment to Afghanistan were determined using RNA sequencing technology. Count-based gene expression quantification, normalization and differential analysis (with thorough correction for confounders) revealed genes associated to PTSD; LRP8 and GOLM1. These preliminary results provide a proof-of-principle for the diagnostic utility of blood-based gene expression profiles for tracking symptoms of post-traumatic stress disorder in soldiers returning from tour. It is also the first to report transcriptome-wide expression profiles alongside a post-traumatic symptom checklist. Genetics Society of America 2019-01-08 /pmc/articles/PMC6385974/ /pubmed/30622122 http://dx.doi.org/10.1534/g3.118.200516 Text en Copyright © 2019 Boscarino et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Investigations
Boscarino, Cathy
Nalpathamkalam, Thomas
Pellecchia, Giovanna
Li, Weili
Thiruvahindrapuram, Bhooma
Merico, Daniele
Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
title Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
title_full Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
title_fullStr Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
title_full_unstemmed Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
title_short Using Next-Generation Sequencing Transcriptomics To Determine Markers of Post-traumatic Symptoms: Preliminary Findings from a Post-deployment Cohort of Soldiers
title_sort using next-generation sequencing transcriptomics to determine markers of post-traumatic symptoms: preliminary findings from a post-deployment cohort of soldiers
topic Investigations
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6385974/
https://www.ncbi.nlm.nih.gov/pubmed/30622122
http://dx.doi.org/10.1534/g3.118.200516
work_keys_str_mv AT boscarinocathy usingnextgenerationsequencingtranscriptomicstodeterminemarkersofposttraumaticsymptomspreliminaryfindingsfromapostdeploymentcohortofsoldiers
AT nalpathamkalamthomas usingnextgenerationsequencingtranscriptomicstodeterminemarkersofposttraumaticsymptomspreliminaryfindingsfromapostdeploymentcohortofsoldiers
AT pellecchiagiovanna usingnextgenerationsequencingtranscriptomicstodeterminemarkersofposttraumaticsymptomspreliminaryfindingsfromapostdeploymentcohortofsoldiers
AT liweili usingnextgenerationsequencingtranscriptomicstodeterminemarkersofposttraumaticsymptomspreliminaryfindingsfromapostdeploymentcohortofsoldiers
AT thiruvahindrapurambhooma usingnextgenerationsequencingtranscriptomicstodeterminemarkersofposttraumaticsymptomspreliminaryfindingsfromapostdeploymentcohortofsoldiers
AT mericodaniele usingnextgenerationsequencingtranscriptomicstodeterminemarkersofposttraumaticsymptomspreliminaryfindingsfromapostdeploymentcohortofsoldiers