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Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships
Mycoplasma dispar is an important pathogen involved in bovine respiratory disease, which causes huge economic losses worldwide. Our knowledge regarding the genomics, pathogenic mechanisms, and genetics of M. dispar is rather limited. In this study, the complete genome of M. dispar GS01 strain was se...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Genetics Society of America
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6385981/ https://www.ncbi.nlm.nih.gov/pubmed/30573467 http://dx.doi.org/10.1534/g3.118.200941 |
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author | Chen, Shengli Hao, Huafang Yan, Xinmin Liu, Yongsheng Chu, Yuefeng |
author_facet | Chen, Shengli Hao, Huafang Yan, Xinmin Liu, Yongsheng Chu, Yuefeng |
author_sort | Chen, Shengli |
collection | PubMed |
description | Mycoplasma dispar is an important pathogen involved in bovine respiratory disease, which causes huge economic losses worldwide. Our knowledge regarding the genomics, pathogenic mechanisms, and genetics of M. dispar is rather limited. In this study, the complete genome of M. dispar GS01 strain was sequenced using PacBio SMRT technology and first genome-wide analyzed. M. dispar GS01 has a single circular chromosome of 1,065,810 bp encoding 825 predicted proteins. Twenty-three potential virulence genes and two pathogenicity islands were identified in M. dispar. This pathogen was cytopathogenic, could form prolific biofilms, and could produce a large amount of H(2)O(2). Methylation analysis revealed adenine and cytosine methylation across the genome and 13 distinct nucleotide motifs. Comparative analysis showed a high collinearity relationship between M. dispar GS01 and type strain ATCC 27140. Phylogenetic analysis demonstrated that M. dispar is genetically close to M. flocculare and M. hyopneumoniae. The data presented in this study will aid further study on the pathogenic mechanisms and evolution of M. dispar. |
format | Online Article Text |
id | pubmed-6385981 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Genetics Society of America |
record_format | MEDLINE/PubMed |
spelling | pubmed-63859812019-02-26 Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships Chen, Shengli Hao, Huafang Yan, Xinmin Liu, Yongsheng Chu, Yuefeng G3 (Bethesda) Genome Report Mycoplasma dispar is an important pathogen involved in bovine respiratory disease, which causes huge economic losses worldwide. Our knowledge regarding the genomics, pathogenic mechanisms, and genetics of M. dispar is rather limited. In this study, the complete genome of M. dispar GS01 strain was sequenced using PacBio SMRT technology and first genome-wide analyzed. M. dispar GS01 has a single circular chromosome of 1,065,810 bp encoding 825 predicted proteins. Twenty-three potential virulence genes and two pathogenicity islands were identified in M. dispar. This pathogen was cytopathogenic, could form prolific biofilms, and could produce a large amount of H(2)O(2). Methylation analysis revealed adenine and cytosine methylation across the genome and 13 distinct nucleotide motifs. Comparative analysis showed a high collinearity relationship between M. dispar GS01 and type strain ATCC 27140. Phylogenetic analysis demonstrated that M. dispar is genetically close to M. flocculare and M. hyopneumoniae. The data presented in this study will aid further study on the pathogenic mechanisms and evolution of M. dispar. Genetics Society of America 2018-12-20 /pmc/articles/PMC6385981/ /pubmed/30573467 http://dx.doi.org/10.1534/g3.118.200941 Text en Copyright © 2019 Chen et al. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited. |
spellingShingle | Genome Report Chen, Shengli Hao, Huafang Yan, Xinmin Liu, Yongsheng Chu, Yuefeng Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships |
title | Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships |
title_full | Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships |
title_fullStr | Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships |
title_full_unstemmed | Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships |
title_short | Genome-Wide Analysis of Mycoplasma dispar Provides Insights into Putative Virulence Factors and Phylogenetic Relationships |
title_sort | genome-wide analysis of mycoplasma dispar provides insights into putative virulence factors and phylogenetic relationships |
topic | Genome Report |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6385981/ https://www.ncbi.nlm.nih.gov/pubmed/30573467 http://dx.doi.org/10.1534/g3.118.200941 |
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