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Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images

Angiography by Optical Coherence Tomography (OCT-A) is a non-invasive retinal imaging modality of recent appearance that allows the visualization of the vascular structure at predefined depths based on the detection of the blood movement through the retinal vasculature. In this way, OCT-A images con...

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Autores principales: Díaz, Macarena, Novo, Jorge, Cutrín, Paula, Gómez-Ulla, Francisco, Penedo, Manuel G., Ortega, Marcos
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6386246/
https://www.ncbi.nlm.nih.gov/pubmed/30794594
http://dx.doi.org/10.1371/journal.pone.0212364
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author Díaz, Macarena
Novo, Jorge
Cutrín, Paula
Gómez-Ulla, Francisco
Penedo, Manuel G.
Ortega, Marcos
author_facet Díaz, Macarena
Novo, Jorge
Cutrín, Paula
Gómez-Ulla, Francisco
Penedo, Manuel G.
Ortega, Marcos
author_sort Díaz, Macarena
collection PubMed
description Angiography by Optical Coherence Tomography (OCT-A) is a non-invasive retinal imaging modality of recent appearance that allows the visualization of the vascular structure at predefined depths based on the detection of the blood movement through the retinal vasculature. In this way, OCT-A images constitute a suitable scenario to analyze the retinal vascular properties of regions of interest as is the case of the macular area, measuring the characteristics of the foveal vascular and avascular zones. Extracted parameters of this region can be used as prognostic factors that determine if the patient suffers from certain pathologies (such as diabetic retinopathy or retinal vein occlusion, among others), indicating the associated pathological degree. The manual extraction of these biomedical parameters is a long, tedious and subjective process, introducing a significant intra and inter-expert variability, which penalizes the utility of the measurements. In addition, the absence of tools that automatically facilitate these calculations encourages the creation of computer-aided diagnosis frameworks that ease the doctor’s work, increasing their productivity and making viable the use of this type of vascular biomarkers. In this work we propose a fully automatic system that identifies and precisely segments the region of the foveal avascular zone (FAZ) using a novel ophthalmological image modality as is OCT-A. The system combines different image processing techniques to firstly identify the region where the FAZ is contained and, secondly, proceed with the extraction of its precise contour. The system was validated using a representative set of 213 healthy and diabetic OCT-A images, providing accurate results with the best correlation with the manual measurements of two experts clinician of 0.93 as well as a Jaccard’s index of 0.82 of the best experimental case in the experiments with healthy OCT-A images. The method also provided satisfactory results in diabetic OCT-A images, with a best correlation coefficient with the manual labeling of an expert clinician of 0.93 and a Jaccard’s index of 0.83. This tool provides an accurate FAZ measurement with the desired objectivity and reproducibility, being very useful for the analysis of relevant vascular diseases through the study of the retinal micro-circulation.
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spelling pubmed-63862462019-03-09 Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images Díaz, Macarena Novo, Jorge Cutrín, Paula Gómez-Ulla, Francisco Penedo, Manuel G. Ortega, Marcos PLoS One Research Article Angiography by Optical Coherence Tomography (OCT-A) is a non-invasive retinal imaging modality of recent appearance that allows the visualization of the vascular structure at predefined depths based on the detection of the blood movement through the retinal vasculature. In this way, OCT-A images constitute a suitable scenario to analyze the retinal vascular properties of regions of interest as is the case of the macular area, measuring the characteristics of the foveal vascular and avascular zones. Extracted parameters of this region can be used as prognostic factors that determine if the patient suffers from certain pathologies (such as diabetic retinopathy or retinal vein occlusion, among others), indicating the associated pathological degree. The manual extraction of these biomedical parameters is a long, tedious and subjective process, introducing a significant intra and inter-expert variability, which penalizes the utility of the measurements. In addition, the absence of tools that automatically facilitate these calculations encourages the creation of computer-aided diagnosis frameworks that ease the doctor’s work, increasing their productivity and making viable the use of this type of vascular biomarkers. In this work we propose a fully automatic system that identifies and precisely segments the region of the foveal avascular zone (FAZ) using a novel ophthalmological image modality as is OCT-A. The system combines different image processing techniques to firstly identify the region where the FAZ is contained and, secondly, proceed with the extraction of its precise contour. The system was validated using a representative set of 213 healthy and diabetic OCT-A images, providing accurate results with the best correlation with the manual measurements of two experts clinician of 0.93 as well as a Jaccard’s index of 0.82 of the best experimental case in the experiments with healthy OCT-A images. The method also provided satisfactory results in diabetic OCT-A images, with a best correlation coefficient with the manual labeling of an expert clinician of 0.93 and a Jaccard’s index of 0.83. This tool provides an accurate FAZ measurement with the desired objectivity and reproducibility, being very useful for the analysis of relevant vascular diseases through the study of the retinal micro-circulation. Public Library of Science 2019-02-22 /pmc/articles/PMC6386246/ /pubmed/30794594 http://dx.doi.org/10.1371/journal.pone.0212364 Text en © 2019 Díaz et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Díaz, Macarena
Novo, Jorge
Cutrín, Paula
Gómez-Ulla, Francisco
Penedo, Manuel G.
Ortega, Marcos
Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images
title Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images
title_full Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images
title_fullStr Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images
title_full_unstemmed Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images
title_short Automatic segmentation of the foveal avascular zone in ophthalmological OCT-A images
title_sort automatic segmentation of the foveal avascular zone in ophthalmological oct-a images
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6386246/
https://www.ncbi.nlm.nih.gov/pubmed/30794594
http://dx.doi.org/10.1371/journal.pone.0212364
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