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Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
Guang-dilong (Pheretima aspergillum) is a traditional Chinese animal medicine that has been used for thousands of years in China. In the present study, we purposed to establish a new rapid identification method for Guang-dilong. We provided a useful technique, loop-mediated isothermal amplification...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Portland Press Ltd.
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6386763/ https://www.ncbi.nlm.nih.gov/pubmed/30705087 http://dx.doi.org/10.1042/BSR20181943 |
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author | Huang, Qing Li, Zhiwu Ma, Zhiguo Li, He Mao, Runqian |
author_facet | Huang, Qing Li, Zhiwu Ma, Zhiguo Li, He Mao, Runqian |
author_sort | Huang, Qing |
collection | PubMed |
description | Guang-dilong (Pheretima aspergillum) is a traditional Chinese animal medicine that has been used for thousands of years in China. In the present study, we purposed to establish a new rapid identification method for Guang-dilong. We provided a useful technique, loop-mediated isothermal amplification (LAMP), to differentiate Guang-dilong from other species. Four specific LAMP primers were designed based on mitochondrial cytochrome c oxidase I (COI) gene sequences of Guang-dilong. LAMP reaction, containing DNA template, four primers, 10× Bst DNA polymerase reaction buffer, dNTPs, MgSO(4), and Bst DNA polymerase, was completed within 60 min at 63°C. The LAMP product can be visualized by adding SYBR Green I or detected by 2% gel electrophoresis. LAMP technology was successfully established for rapid identification of Guang-dilong. In addition, DNA template concentration of 675 fg/μl was the detection limit of LAMP in Guang-dilong, which was 1000-times higher than conventional PCR. The simple, sensitive, and convenient LAMP technique is really suited for on-site identification of Guang-dilong in herbal markets. |
format | Online Article Text |
id | pubmed-6386763 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Portland Press Ltd. |
record_format | MEDLINE/PubMed |
spelling | pubmed-63867632019-03-05 Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification Huang, Qing Li, Zhiwu Ma, Zhiguo Li, He Mao, Runqian Biosci Rep Research Articles Guang-dilong (Pheretima aspergillum) is a traditional Chinese animal medicine that has been used for thousands of years in China. In the present study, we purposed to establish a new rapid identification method for Guang-dilong. We provided a useful technique, loop-mediated isothermal amplification (LAMP), to differentiate Guang-dilong from other species. Four specific LAMP primers were designed based on mitochondrial cytochrome c oxidase I (COI) gene sequences of Guang-dilong. LAMP reaction, containing DNA template, four primers, 10× Bst DNA polymerase reaction buffer, dNTPs, MgSO(4), and Bst DNA polymerase, was completed within 60 min at 63°C. The LAMP product can be visualized by adding SYBR Green I or detected by 2% gel electrophoresis. LAMP technology was successfully established for rapid identification of Guang-dilong. In addition, DNA template concentration of 675 fg/μl was the detection limit of LAMP in Guang-dilong, which was 1000-times higher than conventional PCR. The simple, sensitive, and convenient LAMP technique is really suited for on-site identification of Guang-dilong in herbal markets. Portland Press Ltd. 2019-02-22 /pmc/articles/PMC6386763/ /pubmed/30705087 http://dx.doi.org/10.1042/BSR20181943 Text en © 2019 The Author(s). http://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (http://creativecommons.org/licenses/by/4.0/) . |
spellingShingle | Research Articles Huang, Qing Li, Zhiwu Ma, Zhiguo Li, He Mao, Runqian Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification |
title | Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification |
title_full | Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification |
title_fullStr | Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification |
title_full_unstemmed | Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification |
title_short | Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification |
title_sort | specific and rapid identification of the pheretima aspergillum by loop-mediated isothermal amplification |
topic | Research Articles |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6386763/ https://www.ncbi.nlm.nih.gov/pubmed/30705087 http://dx.doi.org/10.1042/BSR20181943 |
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