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Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification

Guang-dilong (Pheretima aspergillum) is a traditional Chinese animal medicine that has been used for thousands of years in China. In the present study, we purposed to establish a new rapid identification method for Guang-dilong. We provided a useful technique, loop-mediated isothermal amplification...

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Detalles Bibliográficos
Autores principales: Huang, Qing, Li, Zhiwu, Ma, Zhiguo, Li, He, Mao, Runqian
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Portland Press Ltd. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6386763/
https://www.ncbi.nlm.nih.gov/pubmed/30705087
http://dx.doi.org/10.1042/BSR20181943
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author Huang, Qing
Li, Zhiwu
Ma, Zhiguo
Li, He
Mao, Runqian
author_facet Huang, Qing
Li, Zhiwu
Ma, Zhiguo
Li, He
Mao, Runqian
author_sort Huang, Qing
collection PubMed
description Guang-dilong (Pheretima aspergillum) is a traditional Chinese animal medicine that has been used for thousands of years in China. In the present study, we purposed to establish a new rapid identification method for Guang-dilong. We provided a useful technique, loop-mediated isothermal amplification (LAMP), to differentiate Guang-dilong from other species. Four specific LAMP primers were designed based on mitochondrial cytochrome c oxidase I (COI) gene sequences of Guang-dilong. LAMP reaction, containing DNA template, four primers, 10× Bst DNA polymerase reaction buffer, dNTPs, MgSO(4), and Bst DNA polymerase, was completed within 60 min at 63°C. The LAMP product can be visualized by adding SYBR Green I or detected by 2% gel electrophoresis. LAMP technology was successfully established for rapid identification of Guang-dilong. In addition, DNA template concentration of 675 fg/μl was the detection limit of LAMP in Guang-dilong, which was 1000-times higher than conventional PCR. The simple, sensitive, and convenient LAMP technique is really suited for on-site identification of Guang-dilong in herbal markets.
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spelling pubmed-63867632019-03-05 Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification Huang, Qing Li, Zhiwu Ma, Zhiguo Li, He Mao, Runqian Biosci Rep Research Articles Guang-dilong (Pheretima aspergillum) is a traditional Chinese animal medicine that has been used for thousands of years in China. In the present study, we purposed to establish a new rapid identification method for Guang-dilong. We provided a useful technique, loop-mediated isothermal amplification (LAMP), to differentiate Guang-dilong from other species. Four specific LAMP primers were designed based on mitochondrial cytochrome c oxidase I (COI) gene sequences of Guang-dilong. LAMP reaction, containing DNA template, four primers, 10× Bst DNA polymerase reaction buffer, dNTPs, MgSO(4), and Bst DNA polymerase, was completed within 60 min at 63°C. The LAMP product can be visualized by adding SYBR Green I or detected by 2% gel electrophoresis. LAMP technology was successfully established for rapid identification of Guang-dilong. In addition, DNA template concentration of 675 fg/μl was the detection limit of LAMP in Guang-dilong, which was 1000-times higher than conventional PCR. The simple, sensitive, and convenient LAMP technique is really suited for on-site identification of Guang-dilong in herbal markets. Portland Press Ltd. 2019-02-22 /pmc/articles/PMC6386763/ /pubmed/30705087 http://dx.doi.org/10.1042/BSR20181943 Text en © 2019 The Author(s). http://creativecommons.org/licenses/by/4.0/This is an open access article published by Portland Press Limited on behalf of the Biochemical Society and distributed under the Creative Commons Attribution License 4.0 (CC BY) (http://creativecommons.org/licenses/by/4.0/) .
spellingShingle Research Articles
Huang, Qing
Li, Zhiwu
Ma, Zhiguo
Li, He
Mao, Runqian
Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
title Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
title_full Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
title_fullStr Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
title_full_unstemmed Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
title_short Specific and rapid identification of the Pheretima aspergillum by loop-mediated isothermal amplification
title_sort specific and rapid identification of the pheretima aspergillum by loop-mediated isothermal amplification
topic Research Articles
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6386763/
https://www.ncbi.nlm.nih.gov/pubmed/30705087
http://dx.doi.org/10.1042/BSR20181943
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