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Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels

The mTOR pathway is in the process of establishing itself as a key access-point of novel oncological drugs and targeted therapies. This is also reflected by the growing number of mTOR pathway genes included in commercially available next-generation sequencing (NGS) oncology panels. This review summa...

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Autores principales: Seeboeck, Rita, Sarne, Victoria, Haybaeck, Johannes
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6387057/
https://www.ncbi.nlm.nih.gov/pubmed/30764584
http://dx.doi.org/10.3390/ijms20030690
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author Seeboeck, Rita
Sarne, Victoria
Haybaeck, Johannes
author_facet Seeboeck, Rita
Sarne, Victoria
Haybaeck, Johannes
author_sort Seeboeck, Rita
collection PubMed
description The mTOR pathway is in the process of establishing itself as a key access-point of novel oncological drugs and targeted therapies. This is also reflected by the growing number of mTOR pathway genes included in commercially available next-generation sequencing (NGS) oncology panels. This review summarizes the portfolio of medium sized diagnostic, as well as research destined NGS panels and their coverage of the mTOR pathway, including 16 DNA-based panels and the current gene list of Foundation One as a major reference entity. In addition, we give an overview of interesting, mTOR-associated somatic mutations that are not yet incorporated. Especially eukaryotic translation initiation factors (eIFs), a group of mTOR downstream proteins, are on the rise as far as diagnostics and drug targeting in precision medicine are concerned. This review aims to raise awareness for the true coverage of NGS panels, which should be valuable in selecting the ideal platform for diagnostics and research.
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spelling pubmed-63870572019-02-27 Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels Seeboeck, Rita Sarne, Victoria Haybaeck, Johannes Int J Mol Sci Review The mTOR pathway is in the process of establishing itself as a key access-point of novel oncological drugs and targeted therapies. This is also reflected by the growing number of mTOR pathway genes included in commercially available next-generation sequencing (NGS) oncology panels. This review summarizes the portfolio of medium sized diagnostic, as well as research destined NGS panels and their coverage of the mTOR pathway, including 16 DNA-based panels and the current gene list of Foundation One as a major reference entity. In addition, we give an overview of interesting, mTOR-associated somatic mutations that are not yet incorporated. Especially eukaryotic translation initiation factors (eIFs), a group of mTOR downstream proteins, are on the rise as far as diagnostics and drug targeting in precision medicine are concerned. This review aims to raise awareness for the true coverage of NGS panels, which should be valuable in selecting the ideal platform for diagnostics and research. MDPI 2019-02-05 /pmc/articles/PMC6387057/ /pubmed/30764584 http://dx.doi.org/10.3390/ijms20030690 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Review
Seeboeck, Rita
Sarne, Victoria
Haybaeck, Johannes
Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels
title Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels
title_full Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels
title_fullStr Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels
title_full_unstemmed Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels
title_short Current Coverage of the mTOR Pathway by Next-Generation Sequencing Oncology Panels
title_sort current coverage of the mtor pathway by next-generation sequencing oncology panels
topic Review
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6387057/
https://www.ncbi.nlm.nih.gov/pubmed/30764584
http://dx.doi.org/10.3390/ijms20030690
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