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Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases
Plants use surface receptors to perceive information about many aspects of their local environment. These receptors physically interact to form both steady state and signalling competent complexes. The signalling events downstream of receptor activation impact both plant developmental and immune res...
Autores principales: | , , , , , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6390701/ https://www.ncbi.nlm.nih.gov/pubmed/30806640 http://dx.doi.org/10.1038/sdata.2019.25 |
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author | Mott, G. Adam Smakowska-Luzan, Elwira Pasha, Asher Parys, Katarzyna Howton, Timothy C. Neuhold, Jana Lehner, Anita Grünwald, Karin Stolt-Bergner, Peggy Provart, Nicholas J. Mukhtar, M. Shahid Desveaux, Darrell Guttman, David S. Belkhadir, Youssef |
author_facet | Mott, G. Adam Smakowska-Luzan, Elwira Pasha, Asher Parys, Katarzyna Howton, Timothy C. Neuhold, Jana Lehner, Anita Grünwald, Karin Stolt-Bergner, Peggy Provart, Nicholas J. Mukhtar, M. Shahid Desveaux, Darrell Guttman, David S. Belkhadir, Youssef |
author_sort | Mott, G. Adam |
collection | PubMed |
description | Plants use surface receptors to perceive information about many aspects of their local environment. These receptors physically interact to form both steady state and signalling competent complexes. The signalling events downstream of receptor activation impact both plant developmental and immune responses. Here, we present a comprehensive study of the physical interactions between the extracellular domains of leucine-rich repeat receptor kinases (LRR-RKs) in Arabidopsis. Using a sensitized assay, we tested reciprocal interactions among 200 of the 225 Arabidopsis LRR-RKs for a total search space of 40,000 interactions. Applying a stringent statistical cut-off and requiring that interactions performed well in both bait-prey and prey-bait orientations resulted in a high-confidence set of 567 bidirectional interactions. Additionally, we identified a total of 2,586 unidirectional interactions, which passed our stringent statistical cut-off in only one orientation. These datasets will guide further investigation into the regulatory roles of LRR-RKs in plant developmental and immune signalling decisions. |
format | Online Article Text |
id | pubmed-6390701 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group |
record_format | MEDLINE/PubMed |
spelling | pubmed-63907012019-02-27 Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases Mott, G. Adam Smakowska-Luzan, Elwira Pasha, Asher Parys, Katarzyna Howton, Timothy C. Neuhold, Jana Lehner, Anita Grünwald, Karin Stolt-Bergner, Peggy Provart, Nicholas J. Mukhtar, M. Shahid Desveaux, Darrell Guttman, David S. Belkhadir, Youssef Sci Data Data Descriptor Plants use surface receptors to perceive information about many aspects of their local environment. These receptors physically interact to form both steady state and signalling competent complexes. The signalling events downstream of receptor activation impact both plant developmental and immune responses. Here, we present a comprehensive study of the physical interactions between the extracellular domains of leucine-rich repeat receptor kinases (LRR-RKs) in Arabidopsis. Using a sensitized assay, we tested reciprocal interactions among 200 of the 225 Arabidopsis LRR-RKs for a total search space of 40,000 interactions. Applying a stringent statistical cut-off and requiring that interactions performed well in both bait-prey and prey-bait orientations resulted in a high-confidence set of 567 bidirectional interactions. Additionally, we identified a total of 2,586 unidirectional interactions, which passed our stringent statistical cut-off in only one orientation. These datasets will guide further investigation into the regulatory roles of LRR-RKs in plant developmental and immune signalling decisions. Nature Publishing Group 2019-02-26 /pmc/articles/PMC6390701/ /pubmed/30806640 http://dx.doi.org/10.1038/sdata.2019.25 Text en Copyright © 2019, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article. |
spellingShingle | Data Descriptor Mott, G. Adam Smakowska-Luzan, Elwira Pasha, Asher Parys, Katarzyna Howton, Timothy C. Neuhold, Jana Lehner, Anita Grünwald, Karin Stolt-Bergner, Peggy Provart, Nicholas J. Mukhtar, M. Shahid Desveaux, Darrell Guttman, David S. Belkhadir, Youssef Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases |
title | Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases |
title_full | Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases |
title_fullStr | Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases |
title_full_unstemmed | Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases |
title_short | Map of physical interactions between extracellular domains of Arabidopsis leucine-rich repeat receptor kinases |
title_sort | map of physical interactions between extracellular domains of arabidopsis leucine-rich repeat receptor kinases |
topic | Data Descriptor |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6390701/ https://www.ncbi.nlm.nih.gov/pubmed/30806640 http://dx.doi.org/10.1038/sdata.2019.25 |
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