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Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines

The spatial pattern of transgene expression in tetracycline-controlled mouse models is governed primarily by the driver line used to introduce the tetracycline-controlled transactivator (tTA). Detailed maps showing where each tTA driver activates expression are therefore essential for designing and...

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Autores principales: Lillehaug, Sveinung, Yetman, Michael J., Puchades, Maja A., Checinska, Martyna M., Kleven, Heidi, Jankowsky, Joanna L., Bjaalie, Jan G., Leergaard, Trygve B.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6390708/
https://www.ncbi.nlm.nih.gov/pubmed/30806643
http://dx.doi.org/10.1038/sdata.2019.28
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author Lillehaug, Sveinung
Yetman, Michael J.
Puchades, Maja A.
Checinska, Martyna M.
Kleven, Heidi
Jankowsky, Joanna L.
Bjaalie, Jan G.
Leergaard, Trygve B.
author_facet Lillehaug, Sveinung
Yetman, Michael J.
Puchades, Maja A.
Checinska, Martyna M.
Kleven, Heidi
Jankowsky, Joanna L.
Bjaalie, Jan G.
Leergaard, Trygve B.
author_sort Lillehaug, Sveinung
collection PubMed
description The spatial pattern of transgene expression in tetracycline-controlled mouse models is governed primarily by the driver line used to introduce the tetracycline-controlled transactivator (tTA). Detailed maps showing where each tTA driver activates expression are therefore essential for designing and using tet-regulated models, particularly in brain research where cell type and regional specificity determine the circuits affected by conditional gene expression. We have compiled a comprehensive online repository of serial microscopic images showing brain-wide reporter expression for five commonly used tTA driver lines. We have spatially registered all images to a common three-dimensional mouse brain anatomical reference atlas for direct comparison of spatial distribution across lines. The high-resolution images and associated metadata are shared via the web page of the EU Human Brain Project. Images can be inspected using an interactive viewing tool that includes an optional overlay feature providing anatomical delineations and reference atlas coordinates. Interactive viewing is supplemented by semi-quantitative analyses of expression levels within anatomical subregions for each tTA driver line.
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spelling pubmed-63907082019-02-27 Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines Lillehaug, Sveinung Yetman, Michael J. Puchades, Maja A. Checinska, Martyna M. Kleven, Heidi Jankowsky, Joanna L. Bjaalie, Jan G. Leergaard, Trygve B. Sci Data Data Descriptor The spatial pattern of transgene expression in tetracycline-controlled mouse models is governed primarily by the driver line used to introduce the tetracycline-controlled transactivator (tTA). Detailed maps showing where each tTA driver activates expression are therefore essential for designing and using tet-regulated models, particularly in brain research where cell type and regional specificity determine the circuits affected by conditional gene expression. We have compiled a comprehensive online repository of serial microscopic images showing brain-wide reporter expression for five commonly used tTA driver lines. We have spatially registered all images to a common three-dimensional mouse brain anatomical reference atlas for direct comparison of spatial distribution across lines. The high-resolution images and associated metadata are shared via the web page of the EU Human Brain Project. Images can be inspected using an interactive viewing tool that includes an optional overlay feature providing anatomical delineations and reference atlas coordinates. Interactive viewing is supplemented by semi-quantitative analyses of expression levels within anatomical subregions for each tTA driver line. Nature Publishing Group 2019-02-26 /pmc/articles/PMC6390708/ /pubmed/30806643 http://dx.doi.org/10.1038/sdata.2019.28 Text en Copyright © 2019, The Author(s) http://creativecommons.org/licenses/by/4.0/ Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/ The Creative Commons Public Domain Dedication waiver http://creativecommons.org/publicdomain/zero/1.0/ applies to the metadata files made available in this article.
spellingShingle Data Descriptor
Lillehaug, Sveinung
Yetman, Michael J.
Puchades, Maja A.
Checinska, Martyna M.
Kleven, Heidi
Jankowsky, Joanna L.
Bjaalie, Jan G.
Leergaard, Trygve B.
Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
title Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
title_full Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
title_fullStr Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
title_full_unstemmed Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
title_short Brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
title_sort brain-wide distribution of reporter expression in five transgenic tetracycline-transactivator mouse lines
topic Data Descriptor
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6390708/
https://www.ncbi.nlm.nih.gov/pubmed/30806643
http://dx.doi.org/10.1038/sdata.2019.28
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