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Identifying the mechanism for superdiffusivity in mouse fibroblast motility
We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t(1/2) in all directions. Two mechanisms have been proposed to explain such statistics in oth...
Autores principales: | , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Public Library of Science
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6392322/ https://www.ncbi.nlm.nih.gov/pubmed/30763309 http://dx.doi.org/10.1371/journal.pcbi.1006732 |
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author | Passucci, Giuseppe Brasch, Megan E. Henderson, James H. Zaburdaev, Vasily Manning, M. Lisa |
author_facet | Passucci, Giuseppe Brasch, Megan E. Henderson, James H. Zaburdaev, Vasily Manning, M. Lisa |
author_sort | Passucci, Giuseppe |
collection | PubMed |
description | We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t(1/2) in all directions. Two mechanisms have been proposed to explain such statistics in other cell types: run and tumble behavior with Lévy-distributed run times, and ensembles of cells with heterogeneous speed and rotational noise. We develop an automated toolkit that directly compares cell trajectories to the predictions of each model and demonstrate that ensemble-averaged quantities such as the mean-squared displacements and velocity autocorrelation functions are equally well-fit by either model. However, neither model correctly captures the short-timescale behavior quantified by the displacement probability distribution or the turning angle distribution. We develop a hybrid model that includes both run and tumble behavior and heterogeneous noise during the runs, which correctly matches the short-timescale behaviors and indicates that the run times are not Lévy distributed. The analysis tools developed here should be broadly useful for distinguishing between mechanisms for superdiffusivity in other cells types and environments. |
format | Online Article Text |
id | pubmed-6392322 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Public Library of Science |
record_format | MEDLINE/PubMed |
spelling | pubmed-63923222019-03-09 Identifying the mechanism for superdiffusivity in mouse fibroblast motility Passucci, Giuseppe Brasch, Megan E. Henderson, James H. Zaburdaev, Vasily Manning, M. Lisa PLoS Comput Biol Research Article We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t(1/2) in all directions. Two mechanisms have been proposed to explain such statistics in other cell types: run and tumble behavior with Lévy-distributed run times, and ensembles of cells with heterogeneous speed and rotational noise. We develop an automated toolkit that directly compares cell trajectories to the predictions of each model and demonstrate that ensemble-averaged quantities such as the mean-squared displacements and velocity autocorrelation functions are equally well-fit by either model. However, neither model correctly captures the short-timescale behavior quantified by the displacement probability distribution or the turning angle distribution. We develop a hybrid model that includes both run and tumble behavior and heterogeneous noise during the runs, which correctly matches the short-timescale behaviors and indicates that the run times are not Lévy distributed. The analysis tools developed here should be broadly useful for distinguishing between mechanisms for superdiffusivity in other cells types and environments. Public Library of Science 2019-02-14 /pmc/articles/PMC6392322/ /pubmed/30763309 http://dx.doi.org/10.1371/journal.pcbi.1006732 Text en © 2019 Passucci et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited. |
spellingShingle | Research Article Passucci, Giuseppe Brasch, Megan E. Henderson, James H. Zaburdaev, Vasily Manning, M. Lisa Identifying the mechanism for superdiffusivity in mouse fibroblast motility |
title | Identifying the mechanism for superdiffusivity in mouse fibroblast motility |
title_full | Identifying the mechanism for superdiffusivity in mouse fibroblast motility |
title_fullStr | Identifying the mechanism for superdiffusivity in mouse fibroblast motility |
title_full_unstemmed | Identifying the mechanism for superdiffusivity in mouse fibroblast motility |
title_short | Identifying the mechanism for superdiffusivity in mouse fibroblast motility |
title_sort | identifying the mechanism for superdiffusivity in mouse fibroblast motility |
topic | Research Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6392322/ https://www.ncbi.nlm.nih.gov/pubmed/30763309 http://dx.doi.org/10.1371/journal.pcbi.1006732 |
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