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Identifying the mechanism for superdiffusivity in mouse fibroblast motility

We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t(1/2) in all directions. Two mechanisms have been proposed to explain such statistics in oth...

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Autores principales: Passucci, Giuseppe, Brasch, Megan E., Henderson, James H., Zaburdaev, Vasily, Manning, M. Lisa
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Public Library of Science 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6392322/
https://www.ncbi.nlm.nih.gov/pubmed/30763309
http://dx.doi.org/10.1371/journal.pcbi.1006732
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author Passucci, Giuseppe
Brasch, Megan E.
Henderson, James H.
Zaburdaev, Vasily
Manning, M. Lisa
author_facet Passucci, Giuseppe
Brasch, Megan E.
Henderson, James H.
Zaburdaev, Vasily
Manning, M. Lisa
author_sort Passucci, Giuseppe
collection PubMed
description We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t(1/2) in all directions. Two mechanisms have been proposed to explain such statistics in other cell types: run and tumble behavior with Lévy-distributed run times, and ensembles of cells with heterogeneous speed and rotational noise. We develop an automated toolkit that directly compares cell trajectories to the predictions of each model and demonstrate that ensemble-averaged quantities such as the mean-squared displacements and velocity autocorrelation functions are equally well-fit by either model. However, neither model correctly captures the short-timescale behavior quantified by the displacement probability distribution or the turning angle distribution. We develop a hybrid model that includes both run and tumble behavior and heterogeneous noise during the runs, which correctly matches the short-timescale behaviors and indicates that the run times are not Lévy distributed. The analysis tools developed here should be broadly useful for distinguishing between mechanisms for superdiffusivity in other cells types and environments.
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spelling pubmed-63923222019-03-09 Identifying the mechanism for superdiffusivity in mouse fibroblast motility Passucci, Giuseppe Brasch, Megan E. Henderson, James H. Zaburdaev, Vasily Manning, M. Lisa PLoS Comput Biol Research Article We seek to characterize the motility of mouse fibroblasts on 2D substrates. Utilizing automated tracking techniques, we find that cell trajectories are super-diffusive, where displacements scale faster than t(1/2) in all directions. Two mechanisms have been proposed to explain such statistics in other cell types: run and tumble behavior with Lévy-distributed run times, and ensembles of cells with heterogeneous speed and rotational noise. We develop an automated toolkit that directly compares cell trajectories to the predictions of each model and demonstrate that ensemble-averaged quantities such as the mean-squared displacements and velocity autocorrelation functions are equally well-fit by either model. However, neither model correctly captures the short-timescale behavior quantified by the displacement probability distribution or the turning angle distribution. We develop a hybrid model that includes both run and tumble behavior and heterogeneous noise during the runs, which correctly matches the short-timescale behaviors and indicates that the run times are not Lévy distributed. The analysis tools developed here should be broadly useful for distinguishing between mechanisms for superdiffusivity in other cells types and environments. Public Library of Science 2019-02-14 /pmc/articles/PMC6392322/ /pubmed/30763309 http://dx.doi.org/10.1371/journal.pcbi.1006732 Text en © 2019 Passucci et al http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Article
Passucci, Giuseppe
Brasch, Megan E.
Henderson, James H.
Zaburdaev, Vasily
Manning, M. Lisa
Identifying the mechanism for superdiffusivity in mouse fibroblast motility
title Identifying the mechanism for superdiffusivity in mouse fibroblast motility
title_full Identifying the mechanism for superdiffusivity in mouse fibroblast motility
title_fullStr Identifying the mechanism for superdiffusivity in mouse fibroblast motility
title_full_unstemmed Identifying the mechanism for superdiffusivity in mouse fibroblast motility
title_short Identifying the mechanism for superdiffusivity in mouse fibroblast motility
title_sort identifying the mechanism for superdiffusivity in mouse fibroblast motility
topic Research Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6392322/
https://www.ncbi.nlm.nih.gov/pubmed/30763309
http://dx.doi.org/10.1371/journal.pcbi.1006732
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