Cargando…
Haplotype matching in large cohorts using the Li and Stephens model
MOTIVATION: The Li and Stephens model, which approximates the coalescent describing the pattern of variation in a population, underpins a range of key tools and results in genetics. Although highly efficient compared to the coalescent, standard implementations of this model still cannot deal with th...
Autor principal: | Lunter, Gerton |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Oxford University Press
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6394399/ https://www.ncbi.nlm.nih.gov/pubmed/30165547 http://dx.doi.org/10.1093/bioinformatics/bty735 |
Ejemplares similares
-
The solution surface of the Li-Stephens haplotype copying model
por: Jin, Yifan, et al.
Publicado: (2023) -
Minimal Positional Substring Cover: A Haplotype Threading Alternative to Li & Stephens Model
por: Sanaullah, Ahsan, et al.
Publicado: (2023) -
Efficient inference in state-space models through adaptive learning in online Monte Carlo expectation maximization
por: Henderson, Donna, et al.
Publicado: (2019) -
An average-case sublinear forward algorithm for the haploid Li and Stephens model
por: Rosen, Yohei M., et al.
Publicado: (2019) -
An equivariant Bayesian convolutional network predicts recombination hotspots and accurately resolves binding motifs
por: Brown, Richard C, et al.
Publicado: (2019)