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Inferring Temporal Information from a Snapshot of a Dynamic Network
The problem of reverse-engineering the evolution of a dynamic network, known broadly as network archaeology, is one of profound importance in diverse application domains. In analysis of infection spread, it reveals the spatial and temporal processes underlying infection. In analysis of biomolecular...
Autores principales: | , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6395620/ https://www.ncbi.nlm.nih.gov/pubmed/30816140 http://dx.doi.org/10.1038/s41598-019-38912-0 |
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author | Sreedharan, Jithin K. Magner, Abram Grama, Ananth Szpankowski, Wojciech |
author_facet | Sreedharan, Jithin K. Magner, Abram Grama, Ananth Szpankowski, Wojciech |
author_sort | Sreedharan, Jithin K. |
collection | PubMed |
description | The problem of reverse-engineering the evolution of a dynamic network, known broadly as network archaeology, is one of profound importance in diverse application domains. In analysis of infection spread, it reveals the spatial and temporal processes underlying infection. In analysis of biomolecular interaction networks (e.g., protein interaction networks), it reveals early molecules that are known to be differentially implicated in diseases. In economic networks, it reveals flow of capital and associated actors. Beyond these recognized applications, it provides analytical substrates for novel studies – for instance, on the structural and functional evolution of the human brain connectome. In this paper, we model, formulate, and rigorously analyze the problem of inferring the arrival order of nodes in a dynamic network from a single snapshot. We derive limits on solutions to the problem, present methods that approach this limit, and demonstrate the methods on a range of applications, from inferring the evolution of the human brain connectome to conventional citation and social networks, where ground truth is known. |
format | Online Article Text |
id | pubmed-6395620 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-63956202019-03-04 Inferring Temporal Information from a Snapshot of a Dynamic Network Sreedharan, Jithin K. Magner, Abram Grama, Ananth Szpankowski, Wojciech Sci Rep Article The problem of reverse-engineering the evolution of a dynamic network, known broadly as network archaeology, is one of profound importance in diverse application domains. In analysis of infection spread, it reveals the spatial and temporal processes underlying infection. In analysis of biomolecular interaction networks (e.g., protein interaction networks), it reveals early molecules that are known to be differentially implicated in diseases. In economic networks, it reveals flow of capital and associated actors. Beyond these recognized applications, it provides analytical substrates for novel studies – for instance, on the structural and functional evolution of the human brain connectome. In this paper, we model, formulate, and rigorously analyze the problem of inferring the arrival order of nodes in a dynamic network from a single snapshot. We derive limits on solutions to the problem, present methods that approach this limit, and demonstrate the methods on a range of applications, from inferring the evolution of the human brain connectome to conventional citation and social networks, where ground truth is known. Nature Publishing Group UK 2019-02-28 /pmc/articles/PMC6395620/ /pubmed/30816140 http://dx.doi.org/10.1038/s41598-019-38912-0 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Sreedharan, Jithin K. Magner, Abram Grama, Ananth Szpankowski, Wojciech Inferring Temporal Information from a Snapshot of a Dynamic Network |
title | Inferring Temporal Information from a Snapshot of a Dynamic Network |
title_full | Inferring Temporal Information from a Snapshot of a Dynamic Network |
title_fullStr | Inferring Temporal Information from a Snapshot of a Dynamic Network |
title_full_unstemmed | Inferring Temporal Information from a Snapshot of a Dynamic Network |
title_short | Inferring Temporal Information from a Snapshot of a Dynamic Network |
title_sort | inferring temporal information from a snapshot of a dynamic network |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6395620/ https://www.ncbi.nlm.nih.gov/pubmed/30816140 http://dx.doi.org/10.1038/s41598-019-38912-0 |
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