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Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients
Primary open-angle glaucoma (POAG) is the most common form of glaucoma, prevalent in approximately 1–2% of Caucasians in the UK over the age of 40. It is characterised by an open anterior chamber angle, raised intraocular pressure (IOP) and optic nerve damage leading to loss of sight. The myocilin g...
Autores principales: | , , , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6395666/ https://www.ncbi.nlm.nih.gov/pubmed/30816137 http://dx.doi.org/10.1038/s41598-019-38760-y |
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author | O’Gorman, Luke Cree, Angela J. Ward, Daniel Griffiths, Helen L. Sood, Roshan Denniston, Alastair K. Self, Jay E. Ennis, Sarah Lotery, Andrew J. Gibson, Jane |
author_facet | O’Gorman, Luke Cree, Angela J. Ward, Daniel Griffiths, Helen L. Sood, Roshan Denniston, Alastair K. Self, Jay E. Ennis, Sarah Lotery, Andrew J. Gibson, Jane |
author_sort | O’Gorman, Luke |
collection | PubMed |
description | Primary open-angle glaucoma (POAG) is the most common form of glaucoma, prevalent in approximately 1–2% of Caucasians in the UK over the age of 40. It is characterised by an open anterior chamber angle, raised intraocular pressure (IOP) and optic nerve damage leading to loss of sight. The myocilin gene (MYOC) is the most common glaucoma-causing gene, accounting for ~2% of British POAG cases. 358 patients were selected for next generation sequencing (NGS) with the following selection criteria: Caucasian ethnicity, intraocular pressure (IOP) 21–40 mm Hg, cup:disc ratio ≥0.6 and visual field mean deviation ≤−3. The entire MYOC gene (17,321 bp) was captured including the promoter, introns, UTRs and coding exons. We identify 12 exonic variants (one stop-gain, five missense and six synonymous variants), two promoter variants, 133 intronic variants, two 3′ UTR variants and 23 intergenic variants. Four known or predicted pathogenic exonic variants (p.R126W, p.K216K, p.Q368* and p.T419A) were identified across 11 patients, which accounts for 3.07% of this POAG cohort. This is the first time that the entire region of MYOC has been sequenced and variants reported for a cohort of POAG patients. |
format | Online Article Text |
id | pubmed-6395666 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-63956662019-03-04 Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients O’Gorman, Luke Cree, Angela J. Ward, Daniel Griffiths, Helen L. Sood, Roshan Denniston, Alastair K. Self, Jay E. Ennis, Sarah Lotery, Andrew J. Gibson, Jane Sci Rep Article Primary open-angle glaucoma (POAG) is the most common form of glaucoma, prevalent in approximately 1–2% of Caucasians in the UK over the age of 40. It is characterised by an open anterior chamber angle, raised intraocular pressure (IOP) and optic nerve damage leading to loss of sight. The myocilin gene (MYOC) is the most common glaucoma-causing gene, accounting for ~2% of British POAG cases. 358 patients were selected for next generation sequencing (NGS) with the following selection criteria: Caucasian ethnicity, intraocular pressure (IOP) 21–40 mm Hg, cup:disc ratio ≥0.6 and visual field mean deviation ≤−3. The entire MYOC gene (17,321 bp) was captured including the promoter, introns, UTRs and coding exons. We identify 12 exonic variants (one stop-gain, five missense and six synonymous variants), two promoter variants, 133 intronic variants, two 3′ UTR variants and 23 intergenic variants. Four known or predicted pathogenic exonic variants (p.R126W, p.K216K, p.Q368* and p.T419A) were identified across 11 patients, which accounts for 3.07% of this POAG cohort. This is the first time that the entire region of MYOC has been sequenced and variants reported for a cohort of POAG patients. Nature Publishing Group UK 2019-02-28 /pmc/articles/PMC6395666/ /pubmed/30816137 http://dx.doi.org/10.1038/s41598-019-38760-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article O’Gorman, Luke Cree, Angela J. Ward, Daniel Griffiths, Helen L. Sood, Roshan Denniston, Alastair K. Self, Jay E. Ennis, Sarah Lotery, Andrew J. Gibson, Jane Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
title | Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
title_full | Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
title_fullStr | Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
title_full_unstemmed | Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
title_short | Comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
title_sort | comprehensive sequencing of the myocilin gene in a selected cohort of severe primary open-angle glaucoma patients |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6395666/ https://www.ncbi.nlm.nih.gov/pubmed/30816137 http://dx.doi.org/10.1038/s41598-019-38760-y |
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