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A multi-task convolutional deep neural network for variant calling in single molecule sequencing

The accurate identification of DNA sequence variants is an important, but challenging task in genomics. It is particularly difficult for single molecule sequencing, which has a per-nucleotide error rate of ~5–15%. Meeting this demand, we developed Clairvoyante, a multi-task five-layer convolutional...

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Detalles Bibliográficos
Autores principales: Luo, Ruibang, Sedlazeck, Fritz J., Lam, Tak-Wah, Schatz, Michael C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6397153/
https://www.ncbi.nlm.nih.gov/pubmed/30824707
http://dx.doi.org/10.1038/s41467-019-09025-z