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Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds
Duckweeds are small, free-floating, largely asexual and highly neotenous organisms. They display the most rapid growth among flowering plants and are of growing interest in aquaculture and genome biology. Genomic and chromosomal data are still rare. Applying flow-cytometric genome size measurement,...
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6397220/ https://www.ncbi.nlm.nih.gov/pubmed/30824726 http://dx.doi.org/10.1038/s41598-019-39332-w |
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author | Hoang, Phuong T. N. Schubert, Veit Meister, Armin Fuchs, Jörg Schubert, Ingo |
author_facet | Hoang, Phuong T. N. Schubert, Veit Meister, Armin Fuchs, Jörg Schubert, Ingo |
author_sort | Hoang, Phuong T. N. |
collection | PubMed |
description | Duckweeds are small, free-floating, largely asexual and highly neotenous organisms. They display the most rapid growth among flowering plants and are of growing interest in aquaculture and genome biology. Genomic and chromosomal data are still rare. Applying flow-cytometric genome size measurement, microscopic determination of frond, cell and nucleus morphology, as well as fluorescence in situ hybridization (FISH) for localization of ribosomal DNA (rDNA), we compared eleven species, representative for the five duckweed genera to search for potential correlations between genome size, cell and nuclei volume, simplified body architecture (neoteny), chromosome numbers and rDNA loci. We found a ~14-fold genome size variation (from 160 to 2203 Mbp), considerable differences in frond size and shape, highly variable guard cell and nucleus size, chromosome number (from 2n = 36 to 82) and number of 5S and 45S rDNA loci. In general, genome size is positively correlated with guard cell and nucleus volume (p < 0.001) and with the neoteny level and inversely with the frond size. In individual cases these correlations could be blurred for instance by particular body and cell structures which seem to be linked to specific floating styles. Chromosome number and rDNA loci variation between the tested species was independent of the genome size. We could not confirm previously reported intraspecific variation of chromosome numbers between individual clones of the genera Spirodela and Landoltia. |
format | Online Article Text |
id | pubmed-6397220 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-63972202019-03-05 Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds Hoang, Phuong T. N. Schubert, Veit Meister, Armin Fuchs, Jörg Schubert, Ingo Sci Rep Article Duckweeds are small, free-floating, largely asexual and highly neotenous organisms. They display the most rapid growth among flowering plants and are of growing interest in aquaculture and genome biology. Genomic and chromosomal data are still rare. Applying flow-cytometric genome size measurement, microscopic determination of frond, cell and nucleus morphology, as well as fluorescence in situ hybridization (FISH) for localization of ribosomal DNA (rDNA), we compared eleven species, representative for the five duckweed genera to search for potential correlations between genome size, cell and nuclei volume, simplified body architecture (neoteny), chromosome numbers and rDNA loci. We found a ~14-fold genome size variation (from 160 to 2203 Mbp), considerable differences in frond size and shape, highly variable guard cell and nucleus size, chromosome number (from 2n = 36 to 82) and number of 5S and 45S rDNA loci. In general, genome size is positively correlated with guard cell and nucleus volume (p < 0.001) and with the neoteny level and inversely with the frond size. In individual cases these correlations could be blurred for instance by particular body and cell structures which seem to be linked to specific floating styles. Chromosome number and rDNA loci variation between the tested species was independent of the genome size. We could not confirm previously reported intraspecific variation of chromosome numbers between individual clones of the genera Spirodela and Landoltia. Nature Publishing Group UK 2019-03-01 /pmc/articles/PMC6397220/ /pubmed/30824726 http://dx.doi.org/10.1038/s41598-019-39332-w Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Hoang, Phuong T. N. Schubert, Veit Meister, Armin Fuchs, Jörg Schubert, Ingo Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds |
title | Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds |
title_full | Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds |
title_fullStr | Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds |
title_full_unstemmed | Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds |
title_short | Variation in genome size, cell and nucleus volume, chromosome number and rDNA loci among duckweeds |
title_sort | variation in genome size, cell and nucleus volume, chromosome number and rdna loci among duckweeds |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6397220/ https://www.ncbi.nlm.nih.gov/pubmed/30824726 http://dx.doi.org/10.1038/s41598-019-39332-w |
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