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Immune response characterization of endometrial cancer

BACKGROUND: The comprehensive characterization and prognostic relevance of immune activation in endometrial cancer remain largely unknown. RESULTS: We systematically reported a subset of endometrioid-type endometrial cancer characterized by multifaceted immune features such as low tumor purity, high...

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Detalles Bibliográficos
Autor principal: Liu, Yuexin
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Impact Journals LLC 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6398181/
https://www.ncbi.nlm.nih.gov/pubmed/30847026
http://dx.doi.org/10.18632/oncotarget.26630
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author Liu, Yuexin
author_facet Liu, Yuexin
author_sort Liu, Yuexin
collection PubMed
description BACKGROUND: The comprehensive characterization and prognostic relevance of immune activation in endometrial cancer remain largely unknown. RESULTS: We systematically reported a subset of endometrioid-type endometrial cancer characterized by multifaceted immune features such as low tumor purity, high leukocyte percentage, and striking CD8 lymphocytic infiltration with anti-tumor efficacy along with marked upregulation of immunosuppressive gene markers. We also showed that genes whose expression was significantly correlated with better survival were significantly enriched in the immune-related signaling pathways, suggesting that tumor-infiltrating lymphocytes give rise to a favorable prognosis in endometrial cancer. Furthermore, we showed that immune cell recruitment in this subset of tumors is likely due to the transcriptional activation of the STAT1 signaling network. METHODS: We obtained the multi-dimensional genomic data from publicly available databases and correlated them with the four gene expression-based subtypes we recently identified in endometrial cancer. Upstream regulator analysis was used to identify the most significantly enriched transcription regulators and Ingenuity pathway analysis was applied to determine enrichment of signaling pathways in survival-associated genes. Gene set enrichment analysis was performed on the 200-gene T-cell tumor infiltration gene signature comparing Cluster IV with the other three clusters combined. All statistical tests were two-sided, and a P value of less than 0.05 is considered significant across all analyses performed. CONCLUSION: This study helps to identify patients with immune activation who are likely to benefit from emerging immune checkpoint inhibitors.
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spelling pubmed-63981812019-03-07 Immune response characterization of endometrial cancer Liu, Yuexin Oncotarget Research Paper BACKGROUND: The comprehensive characterization and prognostic relevance of immune activation in endometrial cancer remain largely unknown. RESULTS: We systematically reported a subset of endometrioid-type endometrial cancer characterized by multifaceted immune features such as low tumor purity, high leukocyte percentage, and striking CD8 lymphocytic infiltration with anti-tumor efficacy along with marked upregulation of immunosuppressive gene markers. We also showed that genes whose expression was significantly correlated with better survival were significantly enriched in the immune-related signaling pathways, suggesting that tumor-infiltrating lymphocytes give rise to a favorable prognosis in endometrial cancer. Furthermore, we showed that immune cell recruitment in this subset of tumors is likely due to the transcriptional activation of the STAT1 signaling network. METHODS: We obtained the multi-dimensional genomic data from publicly available databases and correlated them with the four gene expression-based subtypes we recently identified in endometrial cancer. Upstream regulator analysis was used to identify the most significantly enriched transcription regulators and Ingenuity pathway analysis was applied to determine enrichment of signaling pathways in survival-associated genes. Gene set enrichment analysis was performed on the 200-gene T-cell tumor infiltration gene signature comparing Cluster IV with the other three clusters combined. All statistical tests were two-sided, and a P value of less than 0.05 is considered significant across all analyses performed. CONCLUSION: This study helps to identify patients with immune activation who are likely to benefit from emerging immune checkpoint inhibitors. Impact Journals LLC 2019-01-29 /pmc/articles/PMC6398181/ /pubmed/30847026 http://dx.doi.org/10.18632/oncotarget.26630 Text en Copyright: © 2019 Liu. http://creativecommons.org/licenses/by/3.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/) 3.0 (CC BY 3.0), which permits unrestricted use, distribution, and reproduction in any medium, provided the original author and source are credited.
spellingShingle Research Paper
Liu, Yuexin
Immune response characterization of endometrial cancer
title Immune response characterization of endometrial cancer
title_full Immune response characterization of endometrial cancer
title_fullStr Immune response characterization of endometrial cancer
title_full_unstemmed Immune response characterization of endometrial cancer
title_short Immune response characterization of endometrial cancer
title_sort immune response characterization of endometrial cancer
topic Research Paper
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6398181/
https://www.ncbi.nlm.nih.gov/pubmed/30847026
http://dx.doi.org/10.18632/oncotarget.26630
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