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Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing

The analysis of atom-to-atom and/or residue-to-residue contacts remains a favoured mode of analysing the mol­ecular packing in crystals. In this contribution, additional tools are highlighted as methods for analysis in order to complement the ‘crystallographer’s tool’, PLATON [Spek (2009). Acta Crys...

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Detalles Bibliográficos
Autores principales: Tan, Sang Loon, Jotani, Mukesh M., Tiekink, Edward R. T.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: International Union of Crystallography 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6399703/
https://www.ncbi.nlm.nih.gov/pubmed/30867939
http://dx.doi.org/10.1107/S2056989019001129
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author Tan, Sang Loon
Jotani, Mukesh M.
Tiekink, Edward R. T.
author_facet Tan, Sang Loon
Jotani, Mukesh M.
Tiekink, Edward R. T.
author_sort Tan, Sang Loon
collection PubMed
description The analysis of atom-to-atom and/or residue-to-residue contacts remains a favoured mode of analysing the mol­ecular packing in crystals. In this contribution, additional tools are highlighted as methods for analysis in order to complement the ‘crystallographer’s tool’, PLATON [Spek (2009). Acta Cryst. D65, 148–155]. Thus, a brief outline of the procedures and what can be learned by using Crystal Explorer [Spackman & Jayatilaka (2009). CrystEngComm 11, 19–23] is presented. Attention is then directed towards evaluating the nature, i.e. attractive/weakly attractive/repulsive, of specific contacts employing NCIPLOT [Johnson et al. (2010). J. Am. Chem. Soc. 132, 6498–6506]. This is complemented by a discussion of the calculation of energy frameworks utilizing the latest version of Crystal Explorer. All the mentioned programs are free of charge and straightforward to use. More importantly, they complement each other to give a more complete picture of how mol­ecules assemble in mol­ecular crystals.
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spelling pubmed-63997032019-03-13 Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing Tan, Sang Loon Jotani, Mukesh M. Tiekink, Edward R. T. Acta Crystallogr E Crystallogr Commun Research Communications The analysis of atom-to-atom and/or residue-to-residue contacts remains a favoured mode of analysing the mol­ecular packing in crystals. In this contribution, additional tools are highlighted as methods for analysis in order to complement the ‘crystallographer’s tool’, PLATON [Spek (2009). Acta Cryst. D65, 148–155]. Thus, a brief outline of the procedures and what can be learned by using Crystal Explorer [Spackman & Jayatilaka (2009). CrystEngComm 11, 19–23] is presented. Attention is then directed towards evaluating the nature, i.e. attractive/weakly attractive/repulsive, of specific contacts employing NCIPLOT [Johnson et al. (2010). J. Am. Chem. Soc. 132, 6498–6506]. This is complemented by a discussion of the calculation of energy frameworks utilizing the latest version of Crystal Explorer. All the mentioned programs are free of charge and straightforward to use. More importantly, they complement each other to give a more complete picture of how mol­ecules assemble in mol­ecular crystals. International Union of Crystallography 2019-02-05 /pmc/articles/PMC6399703/ /pubmed/30867939 http://dx.doi.org/10.1107/S2056989019001129 Text en © Tan et al. 2019 http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution (CC-BY) Licence, which permits unrestricted use, distribution, and reproduction in any medium, provided the original authors and source are cited.http://creativecommons.org/licenses/by/4.0/
spellingShingle Research Communications
Tan, Sang Loon
Jotani, Mukesh M.
Tiekink, Edward R. T.
Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
title Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
title_full Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
title_fullStr Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
title_full_unstemmed Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
title_short Utilizing Hirshfeld surface calculations, non-covalent inter­action (NCI) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
title_sort utilizing hirshfeld surface calculations, non-covalent inter­action (nci) plots and the calculation of inter­action energies in the analysis of mol­ecular packing
topic Research Communications
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6399703/
https://www.ncbi.nlm.nih.gov/pubmed/30867939
http://dx.doi.org/10.1107/S2056989019001129
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