Cargando…

DEvis: an R package for aggregation and visualization of differential expression data

BACKGROUND: Existing tools for the aggregation and visualization of differential expression data have discrete functionality and require that end-users rely on multiple software packages with complex dependencies or manually manipulate data for analysis and interpretation. Furthermore, at present, d...

Descripción completa

Detalles Bibliográficos
Autores principales:	Price, Adam, Caciula, Adrian, Guo, Cheng, Lee, Bohyun, Morrison, Juliet, Rasmussen, Angela, Lipkin, W. Ian, Jain, Komal
Formato:	Online Artículo Texto
Lenguaje:	English
Publicado:	BioMed Central 2019
Materias:	Software
Acceso en línea:	https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6399874/ https://www.ncbi.nlm.nih.gov/pubmed/30832568 http://dx.doi.org/10.1186/s12859-019-2702-z

Ejemplares similares

RankAggreg, an R package for weighted rank aggregation
por: Pihur, Vasyl, et al.
Publicado: (2009)

Devi
por: Frain, Iréne 1950-
Publicado: (1994)

The hill of Devi
por: Forster, E. M. 1879-1970 (Edward Morgan)

Visualizing tumor evolution with the fishplot package for R
por: Miller, Christopher A., et al.
Publicado: (2016)

geneHapR: an R package for gene haplotypic statistics and visualization
por: Zhang, Renliang, et al.
Publicado: (2023)

CorDiffViz: an R package for visualizing multi-omics differential correlation networks
por: Yu, Shiqing, et al.
Publicado: (2021)

PANEV: an R package for a pathway-based network visualization
por: Palombo, Valentino, et al.
Publicado: (2020)

ClineHelpR: an R package for genomic cline outlier detection and visualization
por: Martin, Bradley T., et al.
Publicado: (2021)

Harry Francois Devis
Publicado: (1938)

Dr. Utpala Devi
por: Chaudhury, Abhijit
Publicado: (2021)

annoFuse: an R Package to annotate, prioritize, and interactively explore putative oncogenic RNA fusions
por: Gaonkar, Krutika S., et al.
Publicado: (2020)

caOmicsV: an R package for visualizing multidimensional cancer genomic data
por: Zhang, Hongen, et al.
Publicado: (2016)

EnrichedHeatmap: an R/Bioconductor package for comprehensive visualization of genomic signal associations
por: Gu, Zuguang, et al.
Publicado: (2018)

spatialLIBD: an R/Bioconductor package to visualize spatially-resolved transcriptomics data
por: Pardo, Brenda, et al.
Publicado: (2022)

ggcoverage: an R package to visualize and annotate genome coverage for various NGS data
por: Song, Yabing, et al.
Publicado: (2023)

dna: An R package for differential network analysis
por: Gill, Ryan, et al.
Publicado: (2014)

csdR, an R package for differential co-expression analysis
por: Pettersen, Jakob P., et al.
Publicado: (2022)

ChromoMap: an R package for interactive visualization of multi-omics data and annotation of chromosomes
por: Anand, Lakshay, et al.
Publicado: (2022)

estimateR: an R package to estimate and monitor the effective reproductive number
por: Scire, Jérémie, et al.
Publicado: (2023)

PrAna: an R package to calculate and visualize England NHS primary care prescribing data
por: Jagadeesan, Kishore Kumar, et al.
Publicado: (2022)

Tidyproteomics: an open-source R package and data object for quantitative proteomics post analysis and visualization
por: Jones, Jeff, et al.
Publicado: (2023)

ideal: an R/Bioconductor package for interactive differential expression analysis
por: Marini, Federico, et al.
Publicado: (2020)

wTO: an R package for computing weighted topological overlap and a consensus network with integrated visualization tool
por: Gysi, Deisy Morselli, et al.
Publicado: (2018)

kataegis: an R package for identification and visualization of the genomic localized hypermutation regions using high-throughput sequencing
por: Lin, Xue, et al.
Publicado: (2021)

Snapshot: a package for clustering and visualizing epigenetic history during cell differentiation
por: Xiang, Guanjue, et al.
Publicado: (2023)

rCUR: an R package for CUR matrix decomposition
por: Bodor, András, et al.
Publicado: (2012)

perfectphyloR: An R package for reconstructing perfect phylogenies
por: Karunarathna, Charith B., et al.
Publicado: (2019)

Fragman: an R package for fragment analysis
por: Covarrubias-Pazaran, Giovanny, et al.
Publicado: (2016)

ORdensity: user-friendly R package to identify differentially expressed genes
por: Martínez-Otzeta, José María, et al.
Publicado: (2020)

CompGO: an R package for comparing and visualizing Gene Ontology enrichment differences between DNA binding experiments
por: Waardenberg, Ashley J., et al.
Publicado: (2015)

AllelicImbalance: an R/ bioconductor package for detecting, managing, and visualizing allele expression imbalance data from RNA sequencing
por: Gådin, Jesper R., et al.
Publicado: (2015)

An R package for analyzing and modeling ranking data
por: Lee, Paul H, et al.
Publicado: (2013)

GENLIB: an R package for the analysis of genealogical data
por: Gauvin, Héloïse, et al.
Publicado: (2015)

micropan: an R-package for microbial pan-genomics
por: Snipen, Lars, et al.
Publicado: (2015)

FELLA: an R package to enrich metabolomics data
por: Picart-Armada, Sergio, et al.
Publicado: (2018)

stpm: an R package for stochastic process model
por: Zhbannikov, Ilya Y., et al.
Publicado: (2017)

microclass: an R-package for 16S taxonomy classification
por: Liland, Kristian Hovde, et al.
Publicado: (2017)

sgnesR: An R package for simulating gene expression data from an underlying real gene network structure considering delay parameters
por: Tripathi, Shailesh, et al.
Publicado: (2017)

RevEcoR: an R package for the reverse ecology analysis of microbiomes
por: Cao, Yang, et al.
Publicado: (2016)

Hierarchicell: an R-package for estimating power for tests of differential expression with single-cell data
por: Zimmerman, Kip D., et al.
Publicado: (2021)

Cannot write session to /tmp/vufind_sessions/sess_r5hbu82f46ikiv8nmfaegatl2a