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Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection

Cross-validation (CV) is increasingly popular as a generic method to adjudicate between mathematical models of cognition and behavior. In order to measure model generalizability, CV quantifies out-of-sample predictive performance, and the CV preference goes to the model that predicted the out-of-sam...

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Detalles Bibliográficos
Autores principales: Gronau, Quentin F., Wagenmakers, Eric-Jan
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Springer International Publishing 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6400414/
https://www.ncbi.nlm.nih.gov/pubmed/30906917
http://dx.doi.org/10.1007/s42113-018-0011-7
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author Gronau, Quentin F.
Wagenmakers, Eric-Jan
author_facet Gronau, Quentin F.
Wagenmakers, Eric-Jan
author_sort Gronau, Quentin F.
collection PubMed
description Cross-validation (CV) is increasingly popular as a generic method to adjudicate between mathematical models of cognition and behavior. In order to measure model generalizability, CV quantifies out-of-sample predictive performance, and the CV preference goes to the model that predicted the out-of-sample data best. The advantages of CV include theoretic simplicity and practical feasibility. Despite its prominence, however, the limitations of CV are often underappreciated. Here, we demonstrate the limitations of a particular form of CV—Bayesian leave-one-out cross-validation or LOO—with three concrete examples. In each example, a data set of infinite size is perfectly in line with the predictions of a simple model (i.e., a general law or invariance). Nevertheless, LOO shows bounded and relatively modest support for the simple model. We conclude that CV is not a panacea for model selection.
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spelling pubmed-64004142019-03-22 Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection Gronau, Quentin F. Wagenmakers, Eric-Jan Comput Brain Behav Article Cross-validation (CV) is increasingly popular as a generic method to adjudicate between mathematical models of cognition and behavior. In order to measure model generalizability, CV quantifies out-of-sample predictive performance, and the CV preference goes to the model that predicted the out-of-sample data best. The advantages of CV include theoretic simplicity and practical feasibility. Despite its prominence, however, the limitations of CV are often underappreciated. Here, we demonstrate the limitations of a particular form of CV—Bayesian leave-one-out cross-validation or LOO—with three concrete examples. In each example, a data set of infinite size is perfectly in line with the predictions of a simple model (i.e., a general law or invariance). Nevertheless, LOO shows bounded and relatively modest support for the simple model. We conclude that CV is not a panacea for model selection. Springer International Publishing 2018-09-27 2019 /pmc/articles/PMC6400414/ /pubmed/30906917 http://dx.doi.org/10.1007/s42113-018-0011-7 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made.
spellingShingle Article
Gronau, Quentin F.
Wagenmakers, Eric-Jan
Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
title Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
title_full Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
title_fullStr Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
title_full_unstemmed Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
title_short Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
title_sort limitations of bayesian leave-one-out cross-validation for model selection
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6400414/
https://www.ncbi.nlm.nih.gov/pubmed/30906917
http://dx.doi.org/10.1007/s42113-018-0011-7
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