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Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection
Cross-validation (CV) is increasingly popular as a generic method to adjudicate between mathematical models of cognition and behavior. In order to measure model generalizability, CV quantifies out-of-sample predictive performance, and the CV preference goes to the model that predicted the out-of-sam...
Autores principales: | , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Springer International Publishing
2018
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6400414/ https://www.ncbi.nlm.nih.gov/pubmed/30906917 http://dx.doi.org/10.1007/s42113-018-0011-7 |
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author | Gronau, Quentin F. Wagenmakers, Eric-Jan |
author_facet | Gronau, Quentin F. Wagenmakers, Eric-Jan |
author_sort | Gronau, Quentin F. |
collection | PubMed |
description | Cross-validation (CV) is increasingly popular as a generic method to adjudicate between mathematical models of cognition and behavior. In order to measure model generalizability, CV quantifies out-of-sample predictive performance, and the CV preference goes to the model that predicted the out-of-sample data best. The advantages of CV include theoretic simplicity and practical feasibility. Despite its prominence, however, the limitations of CV are often underappreciated. Here, we demonstrate the limitations of a particular form of CV—Bayesian leave-one-out cross-validation or LOO—with three concrete examples. In each example, a data set of infinite size is perfectly in line with the predictions of a simple model (i.e., a general law or invariance). Nevertheless, LOO shows bounded and relatively modest support for the simple model. We conclude that CV is not a panacea for model selection. |
format | Online Article Text |
id | pubmed-6400414 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | Springer International Publishing |
record_format | MEDLINE/PubMed |
spelling | pubmed-64004142019-03-22 Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection Gronau, Quentin F. Wagenmakers, Eric-Jan Comput Brain Behav Article Cross-validation (CV) is increasingly popular as a generic method to adjudicate between mathematical models of cognition and behavior. In order to measure model generalizability, CV quantifies out-of-sample predictive performance, and the CV preference goes to the model that predicted the out-of-sample data best. The advantages of CV include theoretic simplicity and practical feasibility. Despite its prominence, however, the limitations of CV are often underappreciated. Here, we demonstrate the limitations of a particular form of CV—Bayesian leave-one-out cross-validation or LOO—with three concrete examples. In each example, a data set of infinite size is perfectly in line with the predictions of a simple model (i.e., a general law or invariance). Nevertheless, LOO shows bounded and relatively modest support for the simple model. We conclude that CV is not a panacea for model selection. Springer International Publishing 2018-09-27 2019 /pmc/articles/PMC6400414/ /pubmed/30906917 http://dx.doi.org/10.1007/s42113-018-0011-7 Text en © The Author(s) 2018 Open Access This article is distributed under the terms of the Creative Commons Attribution 4.0 International License (http://creativecommons.org/licenses/by/4.0/), which permits unrestricted use, distribution, and reproduction in any medium, provided you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. |
spellingShingle | Article Gronau, Quentin F. Wagenmakers, Eric-Jan Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection |
title | Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection |
title_full | Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection |
title_fullStr | Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection |
title_full_unstemmed | Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection |
title_short | Limitations of Bayesian Leave-One-Out Cross-Validation for Model Selection |
title_sort | limitations of bayesian leave-one-out cross-validation for model selection |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6400414/ https://www.ncbi.nlm.nih.gov/pubmed/30906917 http://dx.doi.org/10.1007/s42113-018-0011-7 |
work_keys_str_mv | AT gronauquentinf limitationsofbayesianleaveoneoutcrossvalidationformodelselection AT wagenmakersericjan limitationsofbayesianleaveoneoutcrossvalidationformodelselection |