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A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features

Cardiovascular diseases are a public health concern; they remain the leading cause of morbidity and mortality in patients with type 2 diabetes. Phenotypic information available from retinal fundus images and clinical measurements, in addition to genomic data, can identify relevant biomarkers of card...

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Autores principales: Fetit, Ahmed E., Doney, Alexander S., Hogg, Stephen, Wang, Ruixuan, MacGillivray, Tom, Wardlaw, Joanna M., Doubal, Fergus N., McKay, Gareth J., McKenna, Stephen, Trucco, Emanuele
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Nature Publishing Group UK 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6401035/
https://www.ncbi.nlm.nih.gov/pubmed/30837638
http://dx.doi.org/10.1038/s41598-019-40403-1
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author Fetit, Ahmed E.
Doney, Alexander S.
Hogg, Stephen
Wang, Ruixuan
MacGillivray, Tom
Wardlaw, Joanna M.
Doubal, Fergus N.
McKay, Gareth J.
McKenna, Stephen
Trucco, Emanuele
author_facet Fetit, Ahmed E.
Doney, Alexander S.
Hogg, Stephen
Wang, Ruixuan
MacGillivray, Tom
Wardlaw, Joanna M.
Doubal, Fergus N.
McKay, Gareth J.
McKenna, Stephen
Trucco, Emanuele
author_sort Fetit, Ahmed E.
collection PubMed
description Cardiovascular diseases are a public health concern; they remain the leading cause of morbidity and mortality in patients with type 2 diabetes. Phenotypic information available from retinal fundus images and clinical measurements, in addition to genomic data, can identify relevant biomarkers of cardiovascular health. In this study, we assessed whether such biomarkers stratified risks of major adverse cardiac events (MACE). A retrospective analysis was carried out on an extract from the Tayside GoDARTS bioresource of participants with type 2 diabetes (n = 3,891). A total of 519 features were incorporated, summarising morphometric properties of the retinal vasculature, various single nucleotide polymorphisms (SNPs), as well as routine clinical measurements. After imputing missing features, a predictive model was developed on a randomly sampled set (n = 2,918) using L1-regularised logistic regression (lasso). The model was evaluated on an independent set (n = 973) and its performance associated with overall hazard rate after censoring (log-rank p < 0.0001), suggesting that multimodal features were able to capture important knowledge for MACE risk assessment. We further showed through a bootstrap analysis that all three sources of information (retinal, genetic, routine clinical) offer robust signal. Particularly robust features included: tortuousity, width gradient, and branching point retinal groupings; SNPs known to be associated with blood pressure and cardiovascular phenotypic traits; age at imaging; clinical measurements such as blood pressure and high density lipoprotein. This novel approach could be used for fast and sensitive determination of future risks associated with MACE.
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spelling pubmed-64010352019-03-07 A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features Fetit, Ahmed E. Doney, Alexander S. Hogg, Stephen Wang, Ruixuan MacGillivray, Tom Wardlaw, Joanna M. Doubal, Fergus N. McKay, Gareth J. McKenna, Stephen Trucco, Emanuele Sci Rep Article Cardiovascular diseases are a public health concern; they remain the leading cause of morbidity and mortality in patients with type 2 diabetes. Phenotypic information available from retinal fundus images and clinical measurements, in addition to genomic data, can identify relevant biomarkers of cardiovascular health. In this study, we assessed whether such biomarkers stratified risks of major adverse cardiac events (MACE). A retrospective analysis was carried out on an extract from the Tayside GoDARTS bioresource of participants with type 2 diabetes (n = 3,891). A total of 519 features were incorporated, summarising morphometric properties of the retinal vasculature, various single nucleotide polymorphisms (SNPs), as well as routine clinical measurements. After imputing missing features, a predictive model was developed on a randomly sampled set (n = 2,918) using L1-regularised logistic regression (lasso). The model was evaluated on an independent set (n = 973) and its performance associated with overall hazard rate after censoring (log-rank p < 0.0001), suggesting that multimodal features were able to capture important knowledge for MACE risk assessment. We further showed through a bootstrap analysis that all three sources of information (retinal, genetic, routine clinical) offer robust signal. Particularly robust features included: tortuousity, width gradient, and branching point retinal groupings; SNPs known to be associated with blood pressure and cardiovascular phenotypic traits; age at imaging; clinical measurements such as blood pressure and high density lipoprotein. This novel approach could be used for fast and sensitive determination of future risks associated with MACE. Nature Publishing Group UK 2019-03-05 /pmc/articles/PMC6401035/ /pubmed/30837638 http://dx.doi.org/10.1038/s41598-019-40403-1 Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/.
spellingShingle Article
Fetit, Ahmed E.
Doney, Alexander S.
Hogg, Stephen
Wang, Ruixuan
MacGillivray, Tom
Wardlaw, Joanna M.
Doubal, Fergus N.
McKay, Gareth J.
McKenna, Stephen
Trucco, Emanuele
A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
title A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
title_full A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
title_fullStr A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
title_full_unstemmed A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
title_short A multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
title_sort multimodal approach to cardiovascular risk stratification in patients with type 2 diabetes incorporating retinal, genomic and clinical features
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6401035/
https://www.ncbi.nlm.nih.gov/pubmed/30837638
http://dx.doi.org/10.1038/s41598-019-40403-1
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