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Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source
A stable-isotope-labelling method using (15)N-labelled sodium nitrate as a nitrogen source was developed for the toxic dinoflagellate Alexandrium catenella. The labelled saxitoxin analogues (STXs), their precursor, and the biosynthetic intermediates were analyzed by column-switching high-resolution...
Autores principales: | , , , , , , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
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Nature Publishing Group UK
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6401167/ https://www.ncbi.nlm.nih.gov/pubmed/30837523 http://dx.doi.org/10.1038/s41598-019-39708-y |
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author | Cho, Yuko Tsuchiya, Shigeki Omura, Takuo Koike, Kazuhiko Oikawa, Hiroshi Konoki, Keiichi Oshima, Yasukatsu Yotsu-Yamashita, Mari |
author_facet | Cho, Yuko Tsuchiya, Shigeki Omura, Takuo Koike, Kazuhiko Oikawa, Hiroshi Konoki, Keiichi Oshima, Yasukatsu Yotsu-Yamashita, Mari |
author_sort | Cho, Yuko |
collection | PubMed |
description | A stable-isotope-labelling method using (15)N-labelled sodium nitrate as a nitrogen source was developed for the toxic dinoflagellate Alexandrium catenella. The labelled saxitoxin analogues (STXs), their precursor, and the biosynthetic intermediates were analyzed by column-switching high-resolution hydrophilic interaction liquid chromatography with mass spectrometry. The low contents on Day 0, high (15)N incorporation % of Int-C’2 and Int-E’ suggested that their turn-over rates are high and that the sizes of the pool of these compounds are smaller than those of the other intermediates. The experimentally determined isotopomer distributions showed that arginine, Int-C’2, 11-hydroxy-Int-C’2, Int-E’, GTX5, GTX4, C1, and C2, each existed as a combination of three populations that consisted of the non-labelled molecules and the labelled isotopomers representing molecules newly synthesized by incorporation of (15)N assimilated from the medium with two different incorporation rates. The order of (15)N incorporation % values of the labelled populations predicted by this model largely agreed with the proposed biosynthetic route. The stable-isotope-labelling method will be useful for understanding the complex mechanism of nitrogen flux in STX-producing dinoflagellates. |
format | Online Article Text |
id | pubmed-6401167 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Nature Publishing Group UK |
record_format | MEDLINE/PubMed |
spelling | pubmed-64011672019-03-07 Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source Cho, Yuko Tsuchiya, Shigeki Omura, Takuo Koike, Kazuhiko Oikawa, Hiroshi Konoki, Keiichi Oshima, Yasukatsu Yotsu-Yamashita, Mari Sci Rep Article A stable-isotope-labelling method using (15)N-labelled sodium nitrate as a nitrogen source was developed for the toxic dinoflagellate Alexandrium catenella. The labelled saxitoxin analogues (STXs), their precursor, and the biosynthetic intermediates were analyzed by column-switching high-resolution hydrophilic interaction liquid chromatography with mass spectrometry. The low contents on Day 0, high (15)N incorporation % of Int-C’2 and Int-E’ suggested that their turn-over rates are high and that the sizes of the pool of these compounds are smaller than those of the other intermediates. The experimentally determined isotopomer distributions showed that arginine, Int-C’2, 11-hydroxy-Int-C’2, Int-E’, GTX5, GTX4, C1, and C2, each existed as a combination of three populations that consisted of the non-labelled molecules and the labelled isotopomers representing molecules newly synthesized by incorporation of (15)N assimilated from the medium with two different incorporation rates. The order of (15)N incorporation % values of the labelled populations predicted by this model largely agreed with the proposed biosynthetic route. The stable-isotope-labelling method will be useful for understanding the complex mechanism of nitrogen flux in STX-producing dinoflagellates. Nature Publishing Group UK 2019-03-05 /pmc/articles/PMC6401167/ /pubmed/30837523 http://dx.doi.org/10.1038/s41598-019-39708-y Text en © The Author(s) 2019 Open Access This article is licensed under a Creative Commons Attribution 4.0 International License, which permits use, sharing, adaptation, distribution and reproduction in any medium or format, as long as you give appropriate credit to the original author(s) and the source, provide a link to the Creative Commons license, and indicate if changes were made. The images or other third party material in this article are included in the article’s Creative Commons license, unless indicated otherwise in a credit line to the material. If material is not included in the article’s Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. To view a copy of this license, visit http://creativecommons.org/licenses/by/4.0/. |
spellingShingle | Article Cho, Yuko Tsuchiya, Shigeki Omura, Takuo Koike, Kazuhiko Oikawa, Hiroshi Konoki, Keiichi Oshima, Yasukatsu Yotsu-Yamashita, Mari Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source |
title | Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source |
title_full | Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source |
title_fullStr | Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source |
title_full_unstemmed | Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source |
title_short | Metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)N-labelled sodium nitrate as a nitrogen source |
title_sort | metabolomic study of saxitoxin analogues and biosynthetic intermediates in dinoflagellates using (15)n-labelled sodium nitrate as a nitrogen source |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6401167/ https://www.ncbi.nlm.nih.gov/pubmed/30837523 http://dx.doi.org/10.1038/s41598-019-39708-y |
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