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Dielectric Trapping of Biopolymers Translocating through Insulating Membranes

Sensitive sequencing of biopolymers by nanopore-based translocation techniques requires an extension of the time spent by the molecule in the pore. We develop an electrostatic theory of polymer translocation to show that the translocation time can be extended via the dielectric trapping of the polym...

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Detalles Bibliográficos
Autores principales: Buyukdagli, Sahin, Sarabadani, Jalal, Ala-Nissila, Tapio
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2018
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6401742/
https://www.ncbi.nlm.nih.gov/pubmed/30961167
http://dx.doi.org/10.3390/polym10111242
Descripción
Sumario:Sensitive sequencing of biopolymers by nanopore-based translocation techniques requires an extension of the time spent by the molecule in the pore. We develop an electrostatic theory of polymer translocation to show that the translocation time can be extended via the dielectric trapping of the polymer. In dilute salt conditions, the dielectric contrast between the low permittivity membrane and large permittivity solvent gives rise to attractive interactions between the [Formula: see text] and [Formula: see text] portions of the polymer. This self-attraction acts as a dielectric trap that can enhance the translocation time by orders of magnitude. We also find that electrostatic interactions result in the piecewise scaling of the translocation time [Formula: see text] with the polymer length L. In the short polymer regime [Formula: see text] nm where the external drift force dominates electrostatic polymer interactions, the translocation is characterized by the drift behavior [Formula: see text]. In the intermediate length regime [Formula: see text] where [Formula: see text] is the Debye–Hückel screening parameter, the dielectric trap takes over the drift force. As a result, increasing polymer length leads to quasi-exponential growth of the translocation time. Finally, in the regime of long polymers [Formula: see text] where salt screening leads to the saturation of the dielectric trap, the translocation time grows linearly as [Formula: see text]. This strong departure from the drift behavior highlights the essential role played by electrostatic interactions in polymer translocation.