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Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran

BACKGROUND: Legionnaires’ disease is an important public health problem that can cause substantial mortality and morbidity. Legionnaires’ disease-risk estimation may be compromised by uncertainties in Legionella-detection methods. The aim of this study was the detection of L. pneumophila in respirat...

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Autores principales: Moosavian, Mojtaba, Seyed-Mohammadi, Sakineh, Saki, Morteza, Shahi, Fatemeh, Khoshkholgh Sima, Mahtab, Afshar, Davoud, Barati, Sara
Formato: Online Artículo Texto
Lenguaje:English
Publicado: SAGE Publications 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6402708/
https://www.ncbi.nlm.nih.gov/pubmed/30881058
http://dx.doi.org/10.2147/IDR.S198099
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author Moosavian, Mojtaba
Seyed-Mohammadi, Sakineh
Saki, Morteza
Shahi, Fatemeh
Khoshkholgh Sima, Mahtab
Afshar, Davoud
Barati, Sara
author_facet Moosavian, Mojtaba
Seyed-Mohammadi, Sakineh
Saki, Morteza
Shahi, Fatemeh
Khoshkholgh Sima, Mahtab
Afshar, Davoud
Barati, Sara
author_sort Moosavian, Mojtaba
collection PubMed
description BACKGROUND: Legionnaires’ disease is an important public health problem that can cause substantial mortality and morbidity. Legionnaires’ disease-risk estimation may be compromised by uncertainties in Legionella-detection methods. The aim of this study was the detection of L. pneumophila in respiratory specimens of hospitalized patients with respiratory symptoms by culture, PCR, and loop-mediated isothermal amplification (LAMP) methods. METHODS: Sputum and bronchoalveolar lavage samples were obtained from patients with pneumonia admitted to teaching hospitals in Ahvaz, Iran from June 2016 to March 2017. Isolation of Legionella spp. was done by culturing the samples directly onto buffered charcoal–yeast extract and modified Wadowsky–Yee agar medium. Then, PCR and LAMP assays were performed for detection of L. pneumophila via its mip gene in respiratory specimens. RESULTS: A total of 100 respiratory specimens were collected. Our results showed that 1% of the samples were culture positive for Legionella spp., and 3% and 7% of samples were positive for L. pneumophila using the mip gene on PCR and LAMP assays, respectively. CONCLUSION: Legionnaires’ disease should be considered in the diagnosis of pulmonary infectious diseases. Also, the LAMP assay is a faster method with higher sensitivity and specificity than conventional methods, such as PCR and culture, for laboratory diagnosis of Legionnaires’ disease.
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spelling pubmed-64027082019-03-16 Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran Moosavian, Mojtaba Seyed-Mohammadi, Sakineh Saki, Morteza Shahi, Fatemeh Khoshkholgh Sima, Mahtab Afshar, Davoud Barati, Sara Infect Drug Resist Original Research BACKGROUND: Legionnaires’ disease is an important public health problem that can cause substantial mortality and morbidity. Legionnaires’ disease-risk estimation may be compromised by uncertainties in Legionella-detection methods. The aim of this study was the detection of L. pneumophila in respiratory specimens of hospitalized patients with respiratory symptoms by culture, PCR, and loop-mediated isothermal amplification (LAMP) methods. METHODS: Sputum and bronchoalveolar lavage samples were obtained from patients with pneumonia admitted to teaching hospitals in Ahvaz, Iran from June 2016 to March 2017. Isolation of Legionella spp. was done by culturing the samples directly onto buffered charcoal–yeast extract and modified Wadowsky–Yee agar medium. Then, PCR and LAMP assays were performed for detection of L. pneumophila via its mip gene in respiratory specimens. RESULTS: A total of 100 respiratory specimens were collected. Our results showed that 1% of the samples were culture positive for Legionella spp., and 3% and 7% of samples were positive for L. pneumophila using the mip gene on PCR and LAMP assays, respectively. CONCLUSION: Legionnaires’ disease should be considered in the diagnosis of pulmonary infectious diseases. Also, the LAMP assay is a faster method with higher sensitivity and specificity than conventional methods, such as PCR and culture, for laboratory diagnosis of Legionnaires’ disease. SAGE Publications 2019-03-01 /pmc/articles/PMC6402708/ /pubmed/30881058 http://dx.doi.org/10.2147/IDR.S198099 Text en © 2019 Moosavian et al. This work is published and licensed by Dove Medical Press Limited The full terms of this license are available at https://www.dovepress.com/terms.php and incorporate the Creative Commons Attribution – Non Commercial (unported, v3.0) License (http://creativecommons.org/licenses/by-nc/3.0/). By accessing the work you hereby accept the Terms. Non-commercial uses of the work are permitted without any further permission from Dove Medical Press Limited, provided the work is properly attributed.
spellingShingle Original Research
Moosavian, Mojtaba
Seyed-Mohammadi, Sakineh
Saki, Morteza
Shahi, Fatemeh
Khoshkholgh Sima, Mahtab
Afshar, Davoud
Barati, Sara
Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran
title Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran
title_full Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran
title_fullStr Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran
title_full_unstemmed Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran
title_short Loop-mediated isothermal amplification for detection of Legionella pneumophila in respiratory specimens of hospitalized patients in Ahvaz, southwest Iran
title_sort loop-mediated isothermal amplification for detection of legionella pneumophila in respiratory specimens of hospitalized patients in ahvaz, southwest iran
topic Original Research
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6402708/
https://www.ncbi.nlm.nih.gov/pubmed/30881058
http://dx.doi.org/10.2147/IDR.S198099
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