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Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor

Plant architecture characteristics contribute significantly to the microclimate within peanut canopies, affecting weed suppression as well as incidence and severity of foliar and soil-borne diseases. However, plant canopy architecture is difficult to measure and describe quantitatively. In this stud...

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Autores principales: Yuan, Hongbo, Bennett, Rebecca S., Wang, Ning, Chamberlin, Kelly D.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: Frontiers Media S.A. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6403138/
https://www.ncbi.nlm.nih.gov/pubmed/30873193
http://dx.doi.org/10.3389/fpls.2019.00203
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author Yuan, Hongbo
Bennett, Rebecca S.
Wang, Ning
Chamberlin, Kelly D.
author_facet Yuan, Hongbo
Bennett, Rebecca S.
Wang, Ning
Chamberlin, Kelly D.
author_sort Yuan, Hongbo
collection PubMed
description Plant architecture characteristics contribute significantly to the microclimate within peanut canopies, affecting weed suppression as well as incidence and severity of foliar and soil-borne diseases. However, plant canopy architecture is difficult to measure and describe quantitatively. In this study, a ground-based LiDAR sensor was used to scan rows of peanut plants in the field, and a data processing and analysis algorithm was developed to extract feature indices to describe the peanut canopy architecture. A data acquisition platform was constructed to carry the ground-based LiDAR and an RGB camera during field tests. An experimental field was established with three peanut cultivars at Oklahoma State University's Caddo Research Station in Fort Cobb, OK in May and the data collections were conducted once each month from July to September 2015. The ground-based LiDAR used for this research was a line-scan laser scanner with a scan-angle of 100°, an angle resolution of 0.25°, and a scanning speed of 53 ms. The collected line-scanned data were processed using the developed image processing algorithm. The canopy height, width, and shape/density were evaluated. Euler number, entropy, cluster count, and mean number of connected objects were extracted from the image and used to describe the shape of the peanut canopies. The three peanut cultivars were then classified using the shape features and indices. A high correlation was also observed between the LiDAR and ground-truth measurements for plant height. This approach should be useful for phenotyping peanut germplasm for canopy architecture.
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spelling pubmed-64031382019-03-14 Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor Yuan, Hongbo Bennett, Rebecca S. Wang, Ning Chamberlin, Kelly D. Front Plant Sci Plant Science Plant architecture characteristics contribute significantly to the microclimate within peanut canopies, affecting weed suppression as well as incidence and severity of foliar and soil-borne diseases. However, plant canopy architecture is difficult to measure and describe quantitatively. In this study, a ground-based LiDAR sensor was used to scan rows of peanut plants in the field, and a data processing and analysis algorithm was developed to extract feature indices to describe the peanut canopy architecture. A data acquisition platform was constructed to carry the ground-based LiDAR and an RGB camera during field tests. An experimental field was established with three peanut cultivars at Oklahoma State University's Caddo Research Station in Fort Cobb, OK in May and the data collections were conducted once each month from July to September 2015. The ground-based LiDAR used for this research was a line-scan laser scanner with a scan-angle of 100°, an angle resolution of 0.25°, and a scanning speed of 53 ms. The collected line-scanned data were processed using the developed image processing algorithm. The canopy height, width, and shape/density were evaluated. Euler number, entropy, cluster count, and mean number of connected objects were extracted from the image and used to describe the shape of the peanut canopies. The three peanut cultivars were then classified using the shape features and indices. A high correlation was also observed between the LiDAR and ground-truth measurements for plant height. This approach should be useful for phenotyping peanut germplasm for canopy architecture. Frontiers Media S.A. 2019-02-28 /pmc/articles/PMC6403138/ /pubmed/30873193 http://dx.doi.org/10.3389/fpls.2019.00203 Text en Copyright © 2019 Yuan, Bennett, Wang and Chamberlin. http://creativecommons.org/licenses/by/4.0/ This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.
spellingShingle Plant Science
Yuan, Hongbo
Bennett, Rebecca S.
Wang, Ning
Chamberlin, Kelly D.
Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor
title Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor
title_full Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor
title_fullStr Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor
title_full_unstemmed Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor
title_short Development of a Peanut Canopy Measurement System Using a Ground-Based LiDAR Sensor
title_sort development of a peanut canopy measurement system using a ground-based lidar sensor
topic Plant Science
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6403138/
https://www.ncbi.nlm.nih.gov/pubmed/30873193
http://dx.doi.org/10.3389/fpls.2019.00203
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