Cargando…
A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations
A comparative analysis of intramolecular dynamics of four types of isolated dendrimers from the fourth to the seventh generations belonging to the siloxane and carbosilane families, differing in spacer length, core functionality, and the type of chemical bonds, has been performed via atomic molecula...
Autores principales: | , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2018
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6403907/ https://www.ncbi.nlm.nih.gov/pubmed/30960763 http://dx.doi.org/10.3390/polym10080838 |
_version_ | 1783400738277294080 |
---|---|
author | Kurbatov, Andrey O. Balabaev, Nikolay K. Mazo, Mikhail A. Kramarenko, Elena Yu. |
author_facet | Kurbatov, Andrey O. Balabaev, Nikolay K. Mazo, Mikhail A. Kramarenko, Elena Yu. |
author_sort | Kurbatov, Andrey O. |
collection | PubMed |
description | A comparative analysis of intramolecular dynamics of four types of isolated dendrimers from the fourth to the seventh generations belonging to the siloxane and carbosilane families, differing in spacer length, core functionality, and the type of chemical bonds, has been performed via atomic molecular dynamics simulations. The average radial and angular positions of all Si branching atoms of various topological layers within the dendrimer interior, as well as their variations, have been calculated, and the distributions of the relaxation times of their radial and angular motions have been found. It has been shown that the dendrons of all the dendrimers elongate from the center and decrease in a solid angle with an increasing generation number. The characteristic relaxation times of both angular and radial motions of Si atoms are of the order of a few nanoseconds, and they increase with an increasing generation number and decrease with temperature, with the angular relaxation times being larger than the radial ones. The relaxation times in the carbosilanes are larger than those in the siloxanes. The rotational angle dynamics of the carbosilane dendrimers show that the chain bending is mainly realized via trans-gauche transitions in the Si branching bonds. |
format | Online Article Text |
id | pubmed-6403907 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2018 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64039072019-04-02 A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations Kurbatov, Andrey O. Balabaev, Nikolay K. Mazo, Mikhail A. Kramarenko, Elena Yu. Polymers (Basel) Article A comparative analysis of intramolecular dynamics of four types of isolated dendrimers from the fourth to the seventh generations belonging to the siloxane and carbosilane families, differing in spacer length, core functionality, and the type of chemical bonds, has been performed via atomic molecular dynamics simulations. The average radial and angular positions of all Si branching atoms of various topological layers within the dendrimer interior, as well as their variations, have been calculated, and the distributions of the relaxation times of their radial and angular motions have been found. It has been shown that the dendrons of all the dendrimers elongate from the center and decrease in a solid angle with an increasing generation number. The characteristic relaxation times of both angular and radial motions of Si atoms are of the order of a few nanoseconds, and they increase with an increasing generation number and decrease with temperature, with the angular relaxation times being larger than the radial ones. The relaxation times in the carbosilanes are larger than those in the siloxanes. The rotational angle dynamics of the carbosilane dendrimers show that the chain bending is mainly realized via trans-gauche transitions in the Si branching bonds. MDPI 2018-07-30 /pmc/articles/PMC6403907/ /pubmed/30960763 http://dx.doi.org/10.3390/polym10080838 Text en © 2018 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Kurbatov, Andrey O. Balabaev, Nikolay K. Mazo, Mikhail A. Kramarenko, Elena Yu. A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations |
title | A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations |
title_full | A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations |
title_fullStr | A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations |
title_full_unstemmed | A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations |
title_short | A Comparative Study of Intramolecular Mobility of Single Siloxane and Carbosilane Dendrimers via Molecular Dynamics Simulations |
title_sort | comparative study of intramolecular mobility of single siloxane and carbosilane dendrimers via molecular dynamics simulations |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6403907/ https://www.ncbi.nlm.nih.gov/pubmed/30960763 http://dx.doi.org/10.3390/polym10080838 |
work_keys_str_mv | AT kurbatovandreyo acomparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT balabaevnikolayk acomparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT mazomikhaila acomparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT kramarenkoelenayu acomparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT kurbatovandreyo comparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT balabaevnikolayk comparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT mazomikhaila comparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations AT kramarenkoelenayu comparativestudyofintramolecularmobilityofsinglesiloxaneandcarbosilanedendrimersviamoleculardynamicssimulations |