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Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates

Ribonucleoprotein (RNP) granules are membraneless liquid condensates that dynamically form, dissolve, and mature into a gel-like state in response to a changing cellular environment. RNP condensation is largely governed by promiscuous attractive inter-chain interactions mediated by low-complexity do...

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Autores principales: Kaur, Taranpreet, Alshareedah, Ibraheem, Wang, Wei, Ngo, Jason, Moosa, Mahdi Muhammad, Banerjee, Priya R.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6406554/
https://www.ncbi.nlm.nih.gov/pubmed/30791483
http://dx.doi.org/10.3390/biom9020071
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author Kaur, Taranpreet
Alshareedah, Ibraheem
Wang, Wei
Ngo, Jason
Moosa, Mahdi Muhammad
Banerjee, Priya R.
author_facet Kaur, Taranpreet
Alshareedah, Ibraheem
Wang, Wei
Ngo, Jason
Moosa, Mahdi Muhammad
Banerjee, Priya R.
author_sort Kaur, Taranpreet
collection PubMed
description Ribonucleoprotein (RNP) granules are membraneless liquid condensates that dynamically form, dissolve, and mature into a gel-like state in response to a changing cellular environment. RNP condensation is largely governed by promiscuous attractive inter-chain interactions mediated by low-complexity domains (LCDs). Using an archetypal disordered RNP, fused in sarcoma (FUS), here we study how molecular crowding impacts the RNP liquid condensation. We observe that the liquid–liquid coexistence boundary of FUS is lowered by polymer crowders, consistent with an excluded volume model. With increasing bulk crowder concentration, the RNP partition increases and the diffusion rate decreases in the condensed phase. Furthermore, we show that RNP condensates undergo substantial hardening wherein protein-dense droplets transition from viscous fluid to viscoelastic gel-like states in a crowder concentration-dependent manner. Utilizing two distinct LCDs that broadly represent commonly occurring sequence motifs driving RNP phase transitions, we reveal that the impact of crowding is largely independent of LCD charge and sequence patterns. These results are consistent with a thermodynamic model of crowder-mediated depletion interaction, which suggests that inter-RNP attraction is enhanced by molecular crowding. The depletion force is likely to play a key role in tuning the physical properties of RNP condensates within the crowded cellular space.
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spelling pubmed-64065542019-03-13 Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates Kaur, Taranpreet Alshareedah, Ibraheem Wang, Wei Ngo, Jason Moosa, Mahdi Muhammad Banerjee, Priya R. Biomolecules Article Ribonucleoprotein (RNP) granules are membraneless liquid condensates that dynamically form, dissolve, and mature into a gel-like state in response to a changing cellular environment. RNP condensation is largely governed by promiscuous attractive inter-chain interactions mediated by low-complexity domains (LCDs). Using an archetypal disordered RNP, fused in sarcoma (FUS), here we study how molecular crowding impacts the RNP liquid condensation. We observe that the liquid–liquid coexistence boundary of FUS is lowered by polymer crowders, consistent with an excluded volume model. With increasing bulk crowder concentration, the RNP partition increases and the diffusion rate decreases in the condensed phase. Furthermore, we show that RNP condensates undergo substantial hardening wherein protein-dense droplets transition from viscous fluid to viscoelastic gel-like states in a crowder concentration-dependent manner. Utilizing two distinct LCDs that broadly represent commonly occurring sequence motifs driving RNP phase transitions, we reveal that the impact of crowding is largely independent of LCD charge and sequence patterns. These results are consistent with a thermodynamic model of crowder-mediated depletion interaction, which suggests that inter-RNP attraction is enhanced by molecular crowding. The depletion force is likely to play a key role in tuning the physical properties of RNP condensates within the crowded cellular space. MDPI 2019-02-19 /pmc/articles/PMC6406554/ /pubmed/30791483 http://dx.doi.org/10.3390/biom9020071 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Kaur, Taranpreet
Alshareedah, Ibraheem
Wang, Wei
Ngo, Jason
Moosa, Mahdi Muhammad
Banerjee, Priya R.
Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates
title Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates
title_full Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates
title_fullStr Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates
title_full_unstemmed Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates
title_short Molecular Crowding Tunes Material States of Ribonucleoprotein Condensates
title_sort molecular crowding tunes material states of ribonucleoprotein condensates
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6406554/
https://www.ncbi.nlm.nih.gov/pubmed/30791483
http://dx.doi.org/10.3390/biom9020071
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