Cargando…

In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira

Pathogenic Leptospira spp. is the etiological agent of leptospirosis. The high diversity among Leptospira species provides an array to look for important mediators involved in pathogenesis. Toxin-antitoxin (TA) systems represent an important survival mechanism on stress conditions. vapBC modules hav...

Descripción completa

Detalles Bibliográficos
Autores principales: Lopes, Alexandre P. Y., Azevedo, Bruna O. P., Emídio, Rebeca C., Damiano, Deborah K., Nascimento, Ana L. T. O., Barazzone, Giovana C.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: MDPI 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6406750/
https://www.ncbi.nlm.nih.gov/pubmed/30791633
http://dx.doi.org/10.3390/microorganisms7020056
_version_ 1783401394207719424
author Lopes, Alexandre P. Y.
Azevedo, Bruna O. P.
Emídio, Rebeca C.
Damiano, Deborah K.
Nascimento, Ana L. T. O.
Barazzone, Giovana C.
author_facet Lopes, Alexandre P. Y.
Azevedo, Bruna O. P.
Emídio, Rebeca C.
Damiano, Deborah K.
Nascimento, Ana L. T. O.
Barazzone, Giovana C.
author_sort Lopes, Alexandre P. Y.
collection PubMed
description Pathogenic Leptospira spp. is the etiological agent of leptospirosis. The high diversity among Leptospira species provides an array to look for important mediators involved in pathogenesis. Toxin-antitoxin (TA) systems represent an important survival mechanism on stress conditions. vapBC modules have been found in nearly one thousand genomes corresponding to about 40% of known TAs. In the present study, we investigated TA profiles of some strains of Leptospira using a TA database and compared them through protein alignment of VapC toxin sequences among Leptospira spp. genomes. Our analysis identified significant differences in the number of putative vapBC modules distributed in pathogenic, saprophytic, and intermediate strains: four in L. interrogans, three in L. borgpetersenii, eight in L. biflexa, and 15 in L. licerasiae. The VapC toxins show low identity among amino acid sequences within the species. Some VapC toxins appear to be exclusively conserved in unique species, others appear to be conserved among pathogenic or saprophytic strains, and some appear to be distributed randomly. The data shown here indicate that these modules evolved in a very complex manner, which highlights the strong need to identify and characterize new TAs as well as to understand their regulation networks and the possible roles of TA systems in pathogenic bacteria.
format Online
Article
Text
id pubmed-6406750
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher MDPI
record_format MEDLINE/PubMed
spelling pubmed-64067502019-03-26 In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira Lopes, Alexandre P. Y. Azevedo, Bruna O. P. Emídio, Rebeca C. Damiano, Deborah K. Nascimento, Ana L. T. O. Barazzone, Giovana C. Microorganisms Article Pathogenic Leptospira spp. is the etiological agent of leptospirosis. The high diversity among Leptospira species provides an array to look for important mediators involved in pathogenesis. Toxin-antitoxin (TA) systems represent an important survival mechanism on stress conditions. vapBC modules have been found in nearly one thousand genomes corresponding to about 40% of known TAs. In the present study, we investigated TA profiles of some strains of Leptospira using a TA database and compared them through protein alignment of VapC toxin sequences among Leptospira spp. genomes. Our analysis identified significant differences in the number of putative vapBC modules distributed in pathogenic, saprophytic, and intermediate strains: four in L. interrogans, three in L. borgpetersenii, eight in L. biflexa, and 15 in L. licerasiae. The VapC toxins show low identity among amino acid sequences within the species. Some VapC toxins appear to be exclusively conserved in unique species, others appear to be conserved among pathogenic or saprophytic strains, and some appear to be distributed randomly. The data shown here indicate that these modules evolved in a very complex manner, which highlights the strong need to identify and characterize new TAs as well as to understand their regulation networks and the possible roles of TA systems in pathogenic bacteria. MDPI 2019-02-20 /pmc/articles/PMC6406750/ /pubmed/30791633 http://dx.doi.org/10.3390/microorganisms7020056 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/).
spellingShingle Article
Lopes, Alexandre P. Y.
Azevedo, Bruna O. P.
Emídio, Rebeca C.
Damiano, Deborah K.
Nascimento, Ana L. T. O.
Barazzone, Giovana C.
In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
title In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
title_full In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
title_fullStr In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
title_full_unstemmed In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
title_short In Silico Analysis of Genetic VapC Profiles from the Toxin-Antitoxin Type II VapBC Modules among Pathogenic, Intermediate, and Non-Pathogenic Leptospira
title_sort in silico analysis of genetic vapc profiles from the toxin-antitoxin type ii vapbc modules among pathogenic, intermediate, and non-pathogenic leptospira
topic Article
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6406750/
https://www.ncbi.nlm.nih.gov/pubmed/30791633
http://dx.doi.org/10.3390/microorganisms7020056
work_keys_str_mv AT lopesalexandrepy insilicoanalysisofgeneticvapcprofilesfromthetoxinantitoxintypeiivapbcmodulesamongpathogenicintermediateandnonpathogenicleptospira
AT azevedobrunaop insilicoanalysisofgeneticvapcprofilesfromthetoxinantitoxintypeiivapbcmodulesamongpathogenicintermediateandnonpathogenicleptospira
AT emidiorebecac insilicoanalysisofgeneticvapcprofilesfromthetoxinantitoxintypeiivapbcmodulesamongpathogenicintermediateandnonpathogenicleptospira
AT damianodeborahk insilicoanalysisofgeneticvapcprofilesfromthetoxinantitoxintypeiivapbcmodulesamongpathogenicintermediateandnonpathogenicleptospira
AT nascimentoanalto insilicoanalysisofgeneticvapcprofilesfromthetoxinantitoxintypeiivapbcmodulesamongpathogenicintermediateandnonpathogenicleptospira
AT barazzonegiovanac insilicoanalysisofgeneticvapcprofilesfromthetoxinantitoxintypeiivapbcmodulesamongpathogenicintermediateandnonpathogenicleptospira