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Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests
Background: Machine learning (ML) is a promising methodology for classification and prediction applications in healthcare. However, this method has not been practically established for clinical data. Hyperuricemia is a biomarker of various chronic diseases. We aimed to predict uric acid status from...
Autores principales: | , , |
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Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
MDPI
2019
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Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6406925/ https://www.ncbi.nlm.nih.gov/pubmed/30717373 http://dx.doi.org/10.3390/jcm8020172 |
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author | Lee, Sangwoo Choe, Eun Kyung Park, Boram |
author_facet | Lee, Sangwoo Choe, Eun Kyung Park, Boram |
author_sort | Lee, Sangwoo |
collection | PubMed |
description | Background: Machine learning (ML) is a promising methodology for classification and prediction applications in healthcare. However, this method has not been practically established for clinical data. Hyperuricemia is a biomarker of various chronic diseases. We aimed to predict uric acid status from basic healthcare checkup test results using several ML algorithms and to evaluate the performance. Methods: We designed a prediction model for hyperuricemia using a comprehensive health checkup database designed by the classification of ML algorithms, such as discrimination analysis, K-nearest neighbor, naïve Bayes (NBC), support vector machine, decision tree, and random forest classification (RFC). The performance of each algorithm was evaluated and compared with the performance of a conventional logistic regression (CLR) algorithm by receiver operating characteristic curve analysis. Results: Of the 38,001 participants, 7705 were hyperuricemic. For the maximum sensitivity criterion, NBC showed the highest sensitivity (0.73), and RFC showed the second highest (0.66); for the maximum balanced classification rate (BCR) criterion, RFC showed the highest BCR (0.68), and NBC showed the second highest (0.66) among the various ML algorithms for predicting uric acid status. In a comparison to the performance of NBC (area under the curve (AUC) = 0.669, 95% confidence intervals (CI) = 0.669–0.675) and RFC (AUC = 0.775, 95% CI 0.770–0.780) with a CLR algorithm (AUC = 0.568, 95% CI = 0.563–0.571), NBC and RFC showed significantly better performance (p < 0.001). Conclusions: The ML model was superior to the CLR model for the prediction of hyperuricemia. Future studies are needed to determine the best-performing ML algorithms based on data set characteristics. We believe that this study will be informative for studies using ML tools in clinical research. |
format | Online Article Text |
id | pubmed-6406925 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | MDPI |
record_format | MEDLINE/PubMed |
spelling | pubmed-64069252019-03-22 Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests Lee, Sangwoo Choe, Eun Kyung Park, Boram J Clin Med Article Background: Machine learning (ML) is a promising methodology for classification and prediction applications in healthcare. However, this method has not been practically established for clinical data. Hyperuricemia is a biomarker of various chronic diseases. We aimed to predict uric acid status from basic healthcare checkup test results using several ML algorithms and to evaluate the performance. Methods: We designed a prediction model for hyperuricemia using a comprehensive health checkup database designed by the classification of ML algorithms, such as discrimination analysis, K-nearest neighbor, naïve Bayes (NBC), support vector machine, decision tree, and random forest classification (RFC). The performance of each algorithm was evaluated and compared with the performance of a conventional logistic regression (CLR) algorithm by receiver operating characteristic curve analysis. Results: Of the 38,001 participants, 7705 were hyperuricemic. For the maximum sensitivity criterion, NBC showed the highest sensitivity (0.73), and RFC showed the second highest (0.66); for the maximum balanced classification rate (BCR) criterion, RFC showed the highest BCR (0.68), and NBC showed the second highest (0.66) among the various ML algorithms for predicting uric acid status. In a comparison to the performance of NBC (area under the curve (AUC) = 0.669, 95% confidence intervals (CI) = 0.669–0.675) and RFC (AUC = 0.775, 95% CI 0.770–0.780) with a CLR algorithm (AUC = 0.568, 95% CI = 0.563–0.571), NBC and RFC showed significantly better performance (p < 0.001). Conclusions: The ML model was superior to the CLR model for the prediction of hyperuricemia. Future studies are needed to determine the best-performing ML algorithms based on data set characteristics. We believe that this study will be informative for studies using ML tools in clinical research. MDPI 2019-02-02 /pmc/articles/PMC6406925/ /pubmed/30717373 http://dx.doi.org/10.3390/jcm8020172 Text en © 2019 by the authors. Licensee MDPI, Basel, Switzerland. This article is an open access article distributed under the terms and conditions of the Creative Commons Attribution (CC BY) license (http://creativecommons.org/licenses/by/4.0/). |
spellingShingle | Article Lee, Sangwoo Choe, Eun Kyung Park, Boram Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests |
title | Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests |
title_full | Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests |
title_fullStr | Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests |
title_full_unstemmed | Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests |
title_short | Exploration of Machine Learning for Hyperuricemia Prediction Models Based on Basic Health Checkup Tests |
title_sort | exploration of machine learning for hyperuricemia prediction models based on basic health checkup tests |
topic | Article |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6406925/ https://www.ncbi.nlm.nih.gov/pubmed/30717373 http://dx.doi.org/10.3390/jcm8020172 |
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