Cargando…

Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens

This study was undertaken to determine the complete mitochondrial DNA sequence and structure of the mitochondrial genome of Spirometra ranarum, and to compare it with those of S. erinaceieuropaei and S. decipiens. The aim of this study was to provide information of the species level taxonomy of Spir...

Descripción completa

Detalles Bibliográficos
Autores principales: Jeon, Hyeong-Kyu, Park, Hansol, Lee, Dongmin, Choe, Seongjun, Kang, Yeseul, Bia, Mohammed Mebarek, Lee, Sang-Hwa, Eom, Keeseon S.
Formato: Online Artículo Texto
Lenguaje:English
Publicado: The Korean Society for Parasitology and Tropical Medicine 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6409219/
https://www.ncbi.nlm.nih.gov/pubmed/30840801
http://dx.doi.org/10.3347/kjp.2019.57.1.55
_version_ 1783401927732625408
author Jeon, Hyeong-Kyu
Park, Hansol
Lee, Dongmin
Choe, Seongjun
Kang, Yeseul
Bia, Mohammed Mebarek
Lee, Sang-Hwa
Eom, Keeseon S.
author_facet Jeon, Hyeong-Kyu
Park, Hansol
Lee, Dongmin
Choe, Seongjun
Kang, Yeseul
Bia, Mohammed Mebarek
Lee, Sang-Hwa
Eom, Keeseon S.
author_sort Jeon, Hyeong-Kyu
collection PubMed
description This study was undertaken to determine the complete mitochondrial DNA sequence and structure of the mitochondrial genome of Spirometra ranarum, and to compare it with those of S. erinaceieuropaei and S. decipiens. The aim of this study was to provide information of the species level taxonomy of Spirometra spp. using the mitochondrial genomes of 3 Spirometra tapeworms. The S. ranarum isolate originated from Myanmar. The mitochondrial genome sequence of S. ranarum was compared with that of S. erinaceieuropaei (GenBank no. KJ599680) and S. decipiens (Gen-Bank no. KJ599679). The complete mtDNA sequence of S. ranarum comprised 13,644 bp. The S. ranarum mt genome contained 36 genes comprising 12 protein-coding genes, 22 tRNAs and 2 rRNAs. The mt genome lacked the atp8 gene, as found for other cestodes. All genes in the S. ranarum mitochondrial genome are transcribed in the same direction and arranged in the same relative position with respect to gene loci as found for S. erinaceieuropaei and S. decipiens mt genomes. The overall nucleotide sequence divergence of 12 protein-coding genes between S. ranarum and S. decipiens differed by 1.5%, and 100% sequence similarity was found in the cox2 and nad6 genes, while the DNA sequence divergence of the cox1, nad1, and nad4 genes of S. ranarum and S. decipiens was 2.2%, 2.1%, and 2.6%, respectively.
format Online
Article
Text
id pubmed-6409219
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher The Korean Society for Parasitology and Tropical Medicine
record_format MEDLINE/PubMed
spelling pubmed-64092192019-03-15 Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens Jeon, Hyeong-Kyu Park, Hansol Lee, Dongmin Choe, Seongjun Kang, Yeseul Bia, Mohammed Mebarek Lee, Sang-Hwa Eom, Keeseon S. Korean J Parasitol Brief Communication This study was undertaken to determine the complete mitochondrial DNA sequence and structure of the mitochondrial genome of Spirometra ranarum, and to compare it with those of S. erinaceieuropaei and S. decipiens. The aim of this study was to provide information of the species level taxonomy of Spirometra spp. using the mitochondrial genomes of 3 Spirometra tapeworms. The S. ranarum isolate originated from Myanmar. The mitochondrial genome sequence of S. ranarum was compared with that of S. erinaceieuropaei (GenBank no. KJ599680) and S. decipiens (Gen-Bank no. KJ599679). The complete mtDNA sequence of S. ranarum comprised 13,644 bp. The S. ranarum mt genome contained 36 genes comprising 12 protein-coding genes, 22 tRNAs and 2 rRNAs. The mt genome lacked the atp8 gene, as found for other cestodes. All genes in the S. ranarum mitochondrial genome are transcribed in the same direction and arranged in the same relative position with respect to gene loci as found for S. erinaceieuropaei and S. decipiens mt genomes. The overall nucleotide sequence divergence of 12 protein-coding genes between S. ranarum and S. decipiens differed by 1.5%, and 100% sequence similarity was found in the cox2 and nad6 genes, while the DNA sequence divergence of the cox1, nad1, and nad4 genes of S. ranarum and S. decipiens was 2.2%, 2.1%, and 2.6%, respectively. The Korean Society for Parasitology and Tropical Medicine 2019-02 2019-02-26 /pmc/articles/PMC6409219/ /pubmed/30840801 http://dx.doi.org/10.3347/kjp.2019.57.1.55 Text en Copyright © 2019 by The Korean Society for Parasitology and Tropical Medicine This is an Open Access article distributed under the terms of the Creative Commons Attribution Non-Commercial License (http://creativecommons.org/licenses/by-nc/4.0) which permits unrestricted non-commercial use, distribution, and reproduction in any medium, provided the original work is properly cited.
spellingShingle Brief Communication
Jeon, Hyeong-Kyu
Park, Hansol
Lee, Dongmin
Choe, Seongjun
Kang, Yeseul
Bia, Mohammed Mebarek
Lee, Sang-Hwa
Eom, Keeseon S.
Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens
title Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens
title_full Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens
title_fullStr Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens
title_full_unstemmed Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens
title_short Complete Sequence of the Mitochondrial Genome of Spirometra ranarum: Comparison with S. erinaceieuropaei and S. decipiens
title_sort complete sequence of the mitochondrial genome of spirometra ranarum: comparison with s. erinaceieuropaei and s. decipiens
topic Brief Communication
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6409219/
https://www.ncbi.nlm.nih.gov/pubmed/30840801
http://dx.doi.org/10.3347/kjp.2019.57.1.55
work_keys_str_mv AT jeonhyeongkyu completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT parkhansol completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT leedongmin completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT choeseongjun completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT kangyeseul completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT biamohammedmebarek completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT leesanghwa completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens
AT eomkeeseons completesequenceofthemitochondrialgenomeofspirometraranarumcomparisonwithserinaceieuropaeiandsdecipiens