Cargando…
New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases
INTRODUCTION: The Ehlers-Danlos syndrome (EDS) is a non-inflammatory, heritable connective tissue disorder divided into 13 types according to the 2017 International Classification of the Ehlers-Danlos syndromes. One of the subtypes of EDS, classical (cEDS), is characterized by joint hypermobility, s...
Autores principales: | , , , , |
---|---|
Formato: | Online Artículo Texto |
Lenguaje: | English |
Publicado: |
Termedia Publishing House
2019
|
Materias: | |
Acceso en línea: | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6409875/ https://www.ncbi.nlm.nih.gov/pubmed/30858776 http://dx.doi.org/10.5114/ada.2018.79440 |
_version_ | 1783402092888588288 |
---|---|
author | Junkiert-Czarnecka, Anna Pilarska-Deltow, Maria Bąk, Aneta Heise, Marta Haus, Olga |
author_facet | Junkiert-Czarnecka, Anna Pilarska-Deltow, Maria Bąk, Aneta Heise, Marta Haus, Olga |
author_sort | Junkiert-Czarnecka, Anna |
collection | PubMed |
description | INTRODUCTION: The Ehlers-Danlos syndrome (EDS) is a non-inflammatory, heritable connective tissue disorder divided into 13 types according to the 2017 International Classification of the Ehlers-Danlos syndromes. One of the subtypes of EDS, classical (cEDS), is characterized by joint hypermobility, skin hyperextensibility and atrophic scars, which are major criteria of cEDS. AIM: In this study, the first in Central Eastern Europe, 44 patients were investigated. All of them were tested for COL5A1 mutations with direct DNA sequencing. MATERIAL AND METHODS: The study group included 44 patients of Polish origin, all of whom fulfilled criteria for the classical type of Ehlers-Danlos syndrome. Direct sequencing of the COL5A1, COL5A2 and COL1A1 c.934C>T genes was performed for all of them. Evaluation of potential pathogenicity of detected missense mutation was conducted using SIFT (Sorting Intolerant from Tolerant), PolyPhen-2, AlignGVGD (Align Grantham Variance/Grantham Difference). The effect of the splice site mutations was predicted by Human Splicing Finder and NetGene2 tools. RESULTS: Among all tested patients, nine mutations of COL5A1 gene were detected (8 missense mutations and 1 splice site). The alterations identified by us are new, hitherto not described in other reports. Evaluation of the mutations by in silico tools indicate their pathogenicity. CONCLUSIONS: Our study is the first COL5A1 gene molecular investigation conducted among cEDS patients from Central Eastern Europe. Besides new COL5A1 variant findings, we gained molecular confirmation of clinical diagnosis of cEDS. In some cases, specific and adequate evaluation and classification of EDS patients based only on clinical features, may be difficult. |
format | Online Article Text |
id | pubmed-6409875 |
institution | National Center for Biotechnology Information |
language | English |
publishDate | 2019 |
publisher | Termedia Publishing House |
record_format | MEDLINE/PubMed |
spelling | pubmed-64098752019-03-11 New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases Junkiert-Czarnecka, Anna Pilarska-Deltow, Maria Bąk, Aneta Heise, Marta Haus, Olga Postepy Dermatol Alergol Original Paper INTRODUCTION: The Ehlers-Danlos syndrome (EDS) is a non-inflammatory, heritable connective tissue disorder divided into 13 types according to the 2017 International Classification of the Ehlers-Danlos syndromes. One of the subtypes of EDS, classical (cEDS), is characterized by joint hypermobility, skin hyperextensibility and atrophic scars, which are major criteria of cEDS. AIM: In this study, the first in Central Eastern Europe, 44 patients were investigated. All of them were tested for COL5A1 mutations with direct DNA sequencing. MATERIAL AND METHODS: The study group included 44 patients of Polish origin, all of whom fulfilled criteria for the classical type of Ehlers-Danlos syndrome. Direct sequencing of the COL5A1, COL5A2 and COL1A1 c.934C>T genes was performed for all of them. Evaluation of potential pathogenicity of detected missense mutation was conducted using SIFT (Sorting Intolerant from Tolerant), PolyPhen-2, AlignGVGD (Align Grantham Variance/Grantham Difference). The effect of the splice site mutations was predicted by Human Splicing Finder and NetGene2 tools. RESULTS: Among all tested patients, nine mutations of COL5A1 gene were detected (8 missense mutations and 1 splice site). The alterations identified by us are new, hitherto not described in other reports. Evaluation of the mutations by in silico tools indicate their pathogenicity. CONCLUSIONS: Our study is the first COL5A1 gene molecular investigation conducted among cEDS patients from Central Eastern Europe. Besides new COL5A1 variant findings, we gained molecular confirmation of clinical diagnosis of cEDS. In some cases, specific and adequate evaluation and classification of EDS patients based only on clinical features, may be difficult. Termedia Publishing House 2019-02-22 2019-02 /pmc/articles/PMC6409875/ /pubmed/30858776 http://dx.doi.org/10.5114/ada.2018.79440 Text en Copyright: © 2019 Termedia Sp. z o. o. http://creativecommons.org/licenses/by-nc-sa/4.0/ This is an Open Access article distributed under the terms of the Creative Commons Attribution-NonCommercial-ShareAlike 4.0 International (CC BY-NC-SA 4.0) License, allowing third parties to copy and redistribute the material in any medium or format and to remix, transform, and build upon the material, provided the original work is properly cited and states its license. |
spellingShingle | Original Paper Junkiert-Czarnecka, Anna Pilarska-Deltow, Maria Bąk, Aneta Heise, Marta Haus, Olga New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases |
title | New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases |
title_full | New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases |
title_fullStr | New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases |
title_full_unstemmed | New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases |
title_short | New variants in COL5A1 gene among Polish patients with Ehlers-Danlos syndrome: analysis of nine cases |
title_sort | new variants in col5a1 gene among polish patients with ehlers-danlos syndrome: analysis of nine cases |
topic | Original Paper |
url | https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6409875/ https://www.ncbi.nlm.nih.gov/pubmed/30858776 http://dx.doi.org/10.5114/ada.2018.79440 |
work_keys_str_mv | AT junkiertczarneckaanna newvariantsincol5a1geneamongpolishpatientswithehlersdanlossyndromeanalysisofninecases AT pilarskadeltowmaria newvariantsincol5a1geneamongpolishpatientswithehlersdanlossyndromeanalysisofninecases AT bakaneta newvariantsincol5a1geneamongpolishpatientswithehlersdanlossyndromeanalysisofninecases AT heisemarta newvariantsincol5a1geneamongpolishpatientswithehlersdanlossyndromeanalysisofninecases AT hausolga newvariantsincol5a1geneamongpolishpatientswithehlersdanlossyndromeanalysisofninecases |