Cargando…

Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination

Mauremys reevesii is a classical organism with temperature-dependent sex determination (TSD). Gonad development in early life has recently received considerable attention but gonadal maintenance after sex differentiation in turtles with TSD remains a mystery. In this study, we sequenced the transcri...

Descripción completa

Detalles Bibliográficos
Autores principales: Xiong, Lei, Dong, Jinxiu, Jiang, Hui, Zan, Jiawei, Tong, Jiucui, Liu, Jianjun, Wang, Meng, Nie, Liuwang
Formato: Online Artículo Texto
Lenguaje:English
Publicado: PeerJ Inc. 2019
Materias:
Acceso en línea:https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6410691/
https://www.ncbi.nlm.nih.gov/pubmed/30867990
http://dx.doi.org/10.7717/peerj.6557
_version_ 1783402301614981120
author Xiong, Lei
Dong, Jinxiu
Jiang, Hui
Zan, Jiawei
Tong, Jiucui
Liu, Jianjun
Wang, Meng
Nie, Liuwang
author_facet Xiong, Lei
Dong, Jinxiu
Jiang, Hui
Zan, Jiawei
Tong, Jiucui
Liu, Jianjun
Wang, Meng
Nie, Liuwang
author_sort Xiong, Lei
collection PubMed
description Mauremys reevesii is a classical organism with temperature-dependent sex determination (TSD). Gonad development in early life has recently received considerable attention but gonadal maintenance after sex differentiation in turtles with TSD remains a mystery. In this study, we sequenced the transcriptomes for the adult testis and ovary using RNA-seq, and 36,221 transcripts were identified. In total, 1,594 differentially expressed genes (DEGs) were identified where 756 DEGs were upregulated in the testis and 838 DEGs were upregulated in the ovary. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis suggested that the TGF-beta signaling pathway and Hedgehog signaling pathway have important roles in testis maintenance and spermatogenesis, whereas the Hippo signaling pathway and Wnt signaling pathway are likely to participate in ovary maintenance. We determined the existence of antagonistic networks containing significant specific-expressed genes and pathways related to gonadal maintenance and gametogenesis in the adult gonads of M. reevesii. The candidate gene Fibronectin type 3 and ankyrin repeat domains 1 (FANK1) might be involved with the regulation of testis spermatogenesis.
format Online
Article
Text
id pubmed-6410691
institution National Center for Biotechnology Information
language English
publishDate 2019
publisher PeerJ Inc.
record_format MEDLINE/PubMed
spelling pubmed-64106912019-03-13 Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination Xiong, Lei Dong, Jinxiu Jiang, Hui Zan, Jiawei Tong, Jiucui Liu, Jianjun Wang, Meng Nie, Liuwang PeerJ Bioinformatics Mauremys reevesii is a classical organism with temperature-dependent sex determination (TSD). Gonad development in early life has recently received considerable attention but gonadal maintenance after sex differentiation in turtles with TSD remains a mystery. In this study, we sequenced the transcriptomes for the adult testis and ovary using RNA-seq, and 36,221 transcripts were identified. In total, 1,594 differentially expressed genes (DEGs) were identified where 756 DEGs were upregulated in the testis and 838 DEGs were upregulated in the ovary. Gene Ontology and Kyoto Encyclopedia of Genes and Genomes pathway analysis suggested that the TGF-beta signaling pathway and Hedgehog signaling pathway have important roles in testis maintenance and spermatogenesis, whereas the Hippo signaling pathway and Wnt signaling pathway are likely to participate in ovary maintenance. We determined the existence of antagonistic networks containing significant specific-expressed genes and pathways related to gonadal maintenance and gametogenesis in the adult gonads of M. reevesii. The candidate gene Fibronectin type 3 and ankyrin repeat domains 1 (FANK1) might be involved with the regulation of testis spermatogenesis. PeerJ Inc. 2019-03-08 /pmc/articles/PMC6410691/ /pubmed/30867990 http://dx.doi.org/10.7717/peerj.6557 Text en © 2019 Xiong et al. http://creativecommons.org/licenses/by/4.0/ This is an open access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/4.0/) , which permits unrestricted use, distribution, reproduction and adaptation in any medium and for any purpose provided that it is properly attributed. For attribution, the original author(s), title, publication source (PeerJ) and either DOI or URL of the article must be cited.
spellingShingle Bioinformatics
Xiong, Lei
Dong, Jinxiu
Jiang, Hui
Zan, Jiawei
Tong, Jiucui
Liu, Jianjun
Wang, Meng
Nie, Liuwang
Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination
title Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination
title_full Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination
title_fullStr Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination
title_full_unstemmed Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination
title_short Transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in Mauremys reevesii with temperature-dependent sex determination
title_sort transcriptome sequencing and comparative analysis of adult ovary and testis identify potential gonadal maintenance-related genes in mauremys reevesii with temperature-dependent sex determination
topic Bioinformatics
url https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6410691/
https://www.ncbi.nlm.nih.gov/pubmed/30867990
http://dx.doi.org/10.7717/peerj.6557
work_keys_str_mv AT xionglei transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT dongjinxiu transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT jianghui transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT zanjiawei transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT tongjiucui transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT liujianjun transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT wangmeng transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination
AT nieliuwang transcriptomesequencingandcomparativeanalysisofadultovaryandtestisidentifypotentialgonadalmaintenancerelatedgenesinmauremysreevesiiwithtemperaturedependentsexdetermination